RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W KIN4Q01919 800 aa5.89□□□□□ -1.47
SPC42YKL042W USA1Q03714 838 aa5.89□□□□□ -1.47
SPC42YKL042W VAM6Q07468 1049 aa5.89□□□□□ -1.47
SPC42YKL042W BMS1Q08965 1183 aaKnown RBP5.89□□□□□ -1.47
SPC42YKL042W MED1Q12321 566 aa5.89□□□□□ -1.47
SPC42YKL042W RTP1Q12751 981 aa5.89□□□□□ -1.47
SPC42YKL042W TRM2P33753 639 aa5.88□□□□□ -1.47
SPC42YKL042W YHL017WP38745 532 aa5.88□□□□□ -1.47
SPC42YKL042W LNP1P38878 278 aa5.88□□□□□ -1.47
SPC42YKL042W NDE1P40215 560 aa5.88□□□□□ -1.47
SPC42YKL042W NDC80P40460 691 aa5.88□□□□□ -1.47
SPC42YKL042W IST3P40565 148 aaPredicted RBP5.88□□□□□ -1.47
SPC42YKL042W BUD17P53727 317 aa5.88□□□□□ -1.47
SPC42YKL042W SMX3P54999 86 aaPredicted RBP5.88□□□□□ -1.47
SPC42YKL042W TRS23Q03784 219 aa5.88□□□□□ -1.47
SPC42YKL042W TSR2Q06672 205 aaKnown RBP5.88□□□□□ -1.47
SPC42YKL042W LAM4P38800 1345 aa5.88□□□□□ -1.47
SPC42YKL042W YLR302CO13544 120 aa5.87□□□□□ -1.47
SPC42YKL042W ATP2P00830 511 aaKnown RBP5.87□□□□□ -1.47
SPC42YKL042W TY2A-LR1P0C2J4 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-FP0CX61 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-GR2P0CX62 438 aa5.87□□□□□ -1.47
SPC42YKL042W AAC3P18238 307 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-CP25383 438 aa5.87□□□□□ -1.47
SPC42YKL042W LOT5P34234 306 aa5.87□□□□□ -1.47
SPC42YKL042W MPE1P35728 441 aaKnown RBP5.87□□□□□ -1.47
SPC42YKL042W CCL1P37366 393 aa5.87□□□□□ -1.47
SPC42YKL042W NOP16P40007 231 aaKnown RBP5.87□□□□□ -1.47
SPC42YKL042W CTR1P49573 406 aa5.87□□□□□ -1.47
SPC42YKL042W RPS15Q01855 142 aaKnown RBP5.87□□□□□ -1.47
SPC42YKL042W TY2A-DR2Q03483 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-BQ12260 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-OR2Q12293 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-DR1Q12392 438 aa5.87□□□□□ -1.47
SPC42YKL042W TY2A-OR1Q12439 438 aa5.87□□□□□ -1.47
SPC42YKL042W PNO1Q99216 274 aaKnown RBP5.87□□□□□ -1.47
SPC42YKL042W TY2A-DR3Q99303 438 aa5.87□□□□□ -1.47
SPC42YKL042W CDC16P09798 840 aa5.86□□□□□ -1.47
SPC42YKL042W JNM1P36224 373 aa5.86□□□□□ -1.47
SPC42YKL042W AIM21P40563 679 aa5.86□□□□□ -1.47
SPC42YKL042W UPF3P48412 387 aaKnown RBP5.86□□□□□ -1.47
SPC42YKL042W CSL4P53859 292 aaPredicted RBP5.86□□□□□ -1.47
SPC42YKL042W YMR206WQ03695 313 aa5.86□□□□□ -1.47
SPC42YKL042W TGS1Q12052 315 aa5.86□□□□□ -1.47
SPC42YKL042W YER175W-AQ8TGU4 54 aa5.86□□□□□ -1.47
SPC42YKL042W STE4P18851 423 aa5.85□□□□□ -1.47
SPC42YKL042W CNE1P27825 502 aa5.85□□□□□ -1.47
SPC42YKL042W CDC5P32562 705 aa5.85□□□□□ -1.47
SPC42YKL042W MFT1P33441 392 aaKnown RBP5.85□□□□□ -1.47
SPC42YKL042W GMH1P36125 273 aa5.85□□□□□ -1.47
SPC42YKL042W VPS8P39702 1274 aa5.85□□□□□ -1.47
SPC42YKL042W PMT6P42934 759 aa5.85□□□□□ -1.47
SPC42YKL042W BSC5P53755 489 aa5.85□□□□□ -1.47
SPC42YKL042W MTG1Q03151 367 aaPredicted RBP5.85□□□□□ -1.47
SPC42YKL042W STP3Q05937 343 aa5.85□□□□□ -1.47
SPC42YKL042W PUS9Q12069 462 aa5.85□□□□□ -1.47
SPC42YKL042W NBP2Q12163 236 aa5.85□□□□□ -1.47
SPC42YKL042W GLG1P36143 616 aa5.84□□□□□ -1.47
SPC42YKL042W YIL161WP40449 235 aaKnown RBP5.84□□□□□ -1.47
SPC42YKL042W ASE1P50275 885 aa5.84□□□□□ -1.47
SPC42YKL042W SPC98P53540 846 aa5.84□□□□□ -1.47
SPC42YKL042W REG1Q00816 1014 aa5.84□□□□□ -1.47
SPC42YKL042W NGL2Q03264 515 aaKnown RBP5.84□□□□□ -1.47
SPC42YKL042W SKM1Q12469 655 aa5.84□□□□□ -1.47
SPC42YKL042W SEM1O94742 89 aa5.83□□□□□ -1.48
SPC42YKL042W PDE1P22434 369 aa5.83□□□□□ -1.48
SPC42YKL042W URK1P27515 501 aa5.83□□□□□ -1.48
SPC42YKL042W UBS1P38290 277 aa5.83□□□□□ -1.48
SPC42YKL042W PIH1P38768 344 aa5.83□□□□□ -1.48
SPC42YKL042W ARO9P38840 513 aaPredicted RBP5.83□□□□□ -1.48
SPC42YKL042W BDH2P39713 417 aa5.83□□□□□ -1.48
SPC42YKL042W YJR061WP40355 935 aa5.83□□□□□ -1.48
SPC42YKL042W ESL1P40456 1118 aa5.83□□□□□ -1.48
SPC42YKL042W LYS14P40971 790 aa5.83□□□□□ -1.48
SPC42YKL042W MUK1Q02866 612 aa5.83□□□□□ -1.48
SPC42YKL042W YDR179W-AQ03983 463 aa5.83□□□□□ -1.48
SPC42YKL042W YDL073WQ07454 984 aa5.83□□□□□ -1.48
SPC42YKL042W SDH5Q08230 162 aa5.83□□□□□ -1.48
SPC42YKL042W TMA16Q08687 178 aa5.83□□□□□ -1.48
SPC42YKL042W RVB2Q12464 471 aaKnown RBP5.83□□□□□ -1.48
SPC42YKL042W YPK1P12688 680 aaKnown RBP5.82□□□□□ -1.48
SPC42YKL042W SPO16P17122 198 aa5.82□□□□□ -1.48
SPC42YKL042W MRP20P32387 263 aa5.82□□□□□ -1.48
SPC42YKL042W YJL206CP39529 758 aa5.82□□□□□ -1.48
SPC42YKL042W SRB7P47822 140 aa5.82□□□□□ -1.48
SPC42YKL042W SUN4P53616 420 aa5.82□□□□□ -1.48
SPC42YKL042W IMH1Q06704 911 aaKnown RBP5.82□□□□□ -1.48
SPC42YKL042W HBT1Q07653 1046 aaKnown RBP5.82□□□□□ -1.48
SPC42YKL042W ACF2Q12168 779 aa5.82□□□□□ -1.48
SPC42YKL042W YBR255C-AQ3E776 120 aa5.82□□□□□ -1.48
SPC42YKL042W CDC31P06704 161 aaKnown RBP5.81□□□□□ -1.48
SPC42YKL042W MSE1P48525 536 aa5.81□□□□□ -1.48
SPC42YKL042W VPS4P52917 437 aa5.81□□□□□ -1.48
SPC42YKL042W SLI1P53304 468 aa5.81□□□□□ -1.48
SPC42YKL042W RCO1Q04779 684 aa5.81□□□□□ -1.48
SPC42YKL042W SWT1Q12104 458 aa5.81□□□□□ -1.48
SPC42YKL042W MDM20Q12387 796 aaKnown RBP5.81□□□□□ -1.48
SPC42YKL042W ERG27Q12452 347 aaKnown RBP5.81□□□□□ -1.48
SPC42YKL042W AAC1P04710 309 aa5.8□□□□□ -1.48
SPC42YKL042W RPB2P08518 1224 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 146.1 ms