RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C TAO3P40468 2376 aa3.36□□□□□ -1.87
RPB9YGL070C FBP1P09201 348 aa3.36□□□□□ -1.87
RPB9YGL070C LPD1P09624 499 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C CDC16P09798 840 aa3.36□□□□□ -1.87
RPB9YGL070C PCK1P10963 549 aa3.36□□□□□ -1.87
RPB9YGL070C NCP1P16603 691 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C SIR1P21691 654 aa3.36□□□□□ -1.87
RPB9YGL070C PRP22P24384 1145 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C CWH43P25618 953 aa3.36□□□□□ -1.87
RPB9YGL070C IMG2P25642 146 aaPredicted RBP3.36□□□□□ -1.87
RPB9YGL070C HRR25P29295 494 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C PET127P32606 800 aa3.36□□□□□ -1.87
RPB9YGL070C CNS1P33313 385 aa3.36□□□□□ -1.87
RPB9YGL070C APT2P36973 181 aa3.36□□□□□ -1.87
RPB9YGL070C YHR033WP38690 423 aa3.36□□□□□ -1.87
RPB9YGL070C SAK1P38990 1142 aa3.36□□□□□ -1.87
RPB9YGL070C RIC1P40395 1056 aa3.36□□□□□ -1.87
RPB9YGL070C DPH1P40487 425 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C PRM2P40534 656 aa3.36□□□□□ -1.87
RPB9YGL070C ARF3P40994 183 aaRIP-Chip data3.36□□□□□ -1.87not detected
RPB9YGL070C GPD2P41911 440 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C UPF3P48412 387 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C CTF18P49956 741 aa3.36□□□□□ -1.87
RPB9YGL070C REC102Q02721 264 aa3.36□□□□□ -1.87
RPB9YGL070C ERO1Q03103 563 aa3.36□□□□□ -1.87
RPB9YGL070C SYF1Q04048 859 aaPredicted RBP3.36□□□□□ -1.87
RPB9YGL070C VBA4Q04602 768 aaKnown RBP3.36□□□□□ -1.87
RPB9YGL070C IRC3Q06683 689 aa3.36□□□□□ -1.87
RPB9YGL070C CDA1Q06702 301 aa3.36□□□□□ -1.87
RPB9YGL070C CRD1Q07560 283 aa3.36□□□□□ -1.87
RPB9YGL070C SGO1Q08490 590 aa3.36□□□□□ -1.87
RPB9YGL070C NBP2Q12163 236 aa3.36□□□□□ -1.87
RPB9YGL070C RRG1Q12167 365 aaPredicted RBP3.36□□□□□ -1.87
RPB9YGL070C HIF1Q12373 385 aa3.36□□□□□ -1.87
RPB9YGL070C ZRT2Q12436 422 aa3.36□□□□□ -1.87
RPB9YGL070C ATG11Q12527 1178 aa3.36□□□□□ -1.87
RPB9YGL070C HSP82P02829 709 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C HOM3P10869 527 aa3.35□□□□□ -1.87
RPB9YGL070C FRS1P15624 595 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C BET2P20133 325 aa3.35□□□□□ -1.87
RPB9YGL070C HSP104P31539 908 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C VMA8P32610 256 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C CTF8P38877 133 aa3.35□□□□□ -1.87
RPB9YGL070C AXL2P38928 823 aa3.35□□□□□ -1.87
RPB9YGL070C SDP1P40479 209 aa3.35□□□□□ -1.87
RPB9YGL070C MAD2P40958 196 aa3.35□□□□□ -1.87
RPB9YGL070C TAF4P50105 388 aa3.35□□□□□ -1.87
RPB9YGL070C MNT2P53059 558 aa3.35□□□□□ -1.87
RPB9YGL070C NCS6P53088 359 aa3.35□□□□□ -1.87
RPB9YGL070C YGL082WP53155 381 aa3.35□□□□□ -1.87
RPB9YGL070C RSC1P53236 928 aa3.35□□□□□ -1.87
RPB9YGL070C BSC5P53755 489 aa3.35□□□□□ -1.87
RPB9YGL070C YNR071CP53757 342 aa3.35□□□□□ -1.87
RPB9YGL070C LEE1Q02799 301 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C ATG21Q02887 496 aa3.35□□□□□ -1.87
RPB9YGL070C YPS7Q06325 596 aa3.35□□□□□ -1.87
RPB9YGL070C AAD4Q07747 329 aa3.35□□□□□ -1.87
RPB9YGL070C TRM8Q12009 286 aa3.35□□□□□ -1.87
RPB9YGL070C DIN7Q12086 430 aa3.35□□□□□ -1.87
RPB9YGL070C SFI1Q12369 946 aa3.35□□□□□ -1.87
RPB9YGL070C DBP10Q12389 995 aaKnown RBP3.35□□□□□ -1.87
RPB9YGL070C SKM1Q12469 655 aa3.35□□□□□ -1.87
RPB9YGL070C CSR2Q12734 1121 aa3.35□□□□□ -1.87
RPB9YGL070C TUF1P02992 437 aaKnown RBP3.34□□□□□ -1.87
RPB9YGL070C PYC1P11154 1178 aaKnown RBP3.34□□□□□ -1.87
RPB9YGL070C GUK1P15454 187 aaKnown RBP3.34□□□□□ -1.87
RPB9YGL070C HPR1P17629 752 aaKnown RBP3.34□□□□□ -1.87
RPB9YGL070C SED4P25365 1065 aa3.34□□□□□ -1.87
RPB9YGL070C NPL6P32832 435 aa3.34□□□□□ -1.87
RPB9YGL070C ATF1P40353 525 aa3.34□□□□□ -1.87
RPB9YGL070C CAB2P40506 365 aa3.34□□□□□ -1.87
RPB9YGL070C MND2P40577 368 aa3.34□□□□□ -1.87
RPB9YGL070C IMA5P40884 581 aa3.34□□□□□ -1.87
RPB9YGL070C CIR1P42940 261 aa3.34□□□□□ -1.87
RPB9YGL070C IRC6P43615 237 aa3.34□□□□□ -1.87
RPB9YGL070C PRP31P49704 494 aaPredicted RBP3.34□□□□□ -1.87
RPB9YGL070C TEL2P53038 688 aa3.34□□□□□ -1.87
RPB9YGL070C PEF1P53238 335 aa3.34□□□□□ -1.87
RPB9YGL070C PKH1Q03407 766 aa3.34□□□□□ -1.87
RPB9YGL070C MUS81Q04149 632 aaPredicted RBP3.34□□□□□ -1.87
RPB9YGL070C STP4Q07351 490 aa3.34□□□□□ -1.87
RPB9YGL070C AIM39Q08223 395 aa3.34□□□□□ -1.87
RPB9YGL070C ALE1Q08548 619 aa3.34□□□□□ -1.87
RPB9YGL070C RTK1Q12100 620 aaPredicted RBP3.34□□□□□ -1.87
RPB9YGL070C HUA2Q12134 243 aa3.34□□□□□ -1.87
RPB9YGL070C SWM1Q12379 170 aa3.34□□□□□ -1.87
RPB9YGL070C SMC6Q12749 1114 aa3.34□□□□□ -1.87
RPB9YGL070C TPK1P06244 397 aa3.33□□□□□ -1.88
RPB9YGL070C SPE1P08432 466 aa3.33□□□□□ -1.88
RPB9YGL070C ERG20P08524 352 aaKnown RBP3.33□□□□□ -1.88
RPB9YGL070C SPO16P17122 198 aa3.33□□□□□ -1.88
RPB9YGL070C SEC15P22224 910 aa3.33□□□□□ -1.88
RPB9YGL070C RIT1P23796 513 aa3.33□□□□□ -1.88
RPB9YGL070C SWC3P31376 625 aa3.33□□□□□ -1.88
RPB9YGL070C DBF4P32325 704 aa3.33□□□□□ -1.88
RPB9YGL070C CBF2P32504 956 aa3.33□□□□□ -1.88
RPB9YGL070C FRD1P32614 470 aaKnown RBP3.33□□□□□ -1.88
RPB9YGL070C DHR2P36009 735 aaPredicted RBP3.33□□□□□ -1.88
RPB9YGL070C IFA38P38286 347 aa3.33□□□□□ -1.88
RPB9YGL070C YBR259WP38338 688 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms