RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MLP2P40457 1679 aa2.93□□□□□ -1.94
NIC96YFR002W GSY2P27472 705 aa2.93□□□□□ -1.94
NIC96YFR002W MAD2P40958 196 aa2.93□□□□□ -1.94
NIC96YFR002W WAR1Q03631 944 aa2.93□□□□□ -1.94
NIC96YFR002W SMC4Q12267 1418 aa2.93□□□□□ -1.94
NIC96YFR002W ARO1P08566 1588 aaKnown RBP2.93□□□□□ -1.94
NIC96YFR002W PDR10P51533 1564 aa2.93□□□□□ -1.94
NIC96YFR002W STU1P38198 1513 aa2.93□□□□□ -1.94
NIC96YFR002W AAC1P04710 309 aa2.92□□□□□ -1.94
NIC96YFR002W YPK1P12688 680 aaKnown RBP2.92□□□□□ -1.94
NIC96YFR002W YJU2P28320 278 aaPredicted RBP2.92□□□□□ -1.94
NIC96YFR002W GAT1P43574 510 aa2.92□□□□□ -1.94
NIC96YFR002W COG6P53959 839 aa2.92□□□□□ -1.94
NIC96YFR002W DIN7Q12086 430 aa2.92□□□□□ -1.94
NIC96YFR002W IQG1Q12280 1495 aa2.92□□□□□ -1.94
NIC96YFR002W URA3P03962 267 aa2.92□□□□□ -1.94
NIC96YFR002W CDC5P32562 705 aa2.92□□□□□ -1.94
NIC96YFR002W BEM3P32873 1128 aa2.92□□□□□ -1.94
NIC96YFR002W SSN2P38931 1420 aa2.92□□□□□ -1.94
NIC96YFR002W SLD3P53135 668 aa2.92□□□□□ -1.94
NIC96YFR002W MDR1P53258 950 aa2.92□□□□□ -1.94
NIC96YFR002W YNR071CP53757 342 aa2.92□□□□□ -1.94
NIC96YFR002W IRC3Q06683 689 aa2.92□□□□□ -1.94
NIC96YFR002W YLR111WQ12528 110 aa2.92□□□□□ -1.94
NIC96YFR002W TY3B-GQ99315 1547 aa2.92□□□□□ -1.94
NIC96YFR002W SPP41P38904 1435 aa2.91□□□□□ -1.94
NIC96YFR002W SEC12P11655 471 aa2.91□□□□□ -1.94
NIC96YFR002W ECM32P32644 1121 aaKnown RBP2.91□□□□□ -1.94
NIC96YFR002W SAE2P46946 345 aa2.91□□□□□ -1.94
NIC96YFR002W NMD5P46970 1048 aa2.91□□□□□ -1.94
NIC96YFR002W ORM2Q06144 216 aa2.91□□□□□ -1.94
NIC96YFR002W VTH1P40438 1549 aa2.91□□□□□ -1.94
NIC96YFR002W VTH2P40890 1549 aa2.91□□□□□ -1.94
NIC96YFR002W BET2P20133 325 aa2.91□□□□□ -1.94
NIC96YFR002W MRPL9P31334 269 aa2.91□□□□□ -1.94
NIC96YFR002W APD1P38281 316 aa2.91□□□□□ -1.94
NIC96YFR002W OPT1P40897 799 aa2.91□□□□□ -1.94
NIC96YFR002W PSA1P41940 361 aaKnown RBP2.91□□□□□ -1.94
NIC96YFR002W ATG36P46983 293 aa2.91□□□□□ -1.94
NIC96YFR002W COS12P53053 380 aa2.91□□□□□ -1.94
NIC96YFR002W BSP1Q06604 576 aa2.91□□□□□ -1.94
NIC96YFR002W PEX15Q08215 383 aa2.91□□□□□ -1.94
NIC96YFR002W RGT2Q12300 763 aa2.91□□□□□ -1.94
NIC96YFR002W RDL1Q12305 139 aaKnown RBP2.91□□□□□ -1.94
NIC96YFR002W STL1P39932 569 aa2.9□□□□□ -1.94
NIC96YFR002W BPL1P48445 690 aaPredicted RBP2.9□□□□□ -1.94
NIC96YFR002W SEC5P89102 971 aa2.9□□□□□ -1.94
NIC96YFR002W STP1Q00947 519 aa2.9□□□□□ -1.94
NIC96YFR002W RSC9Q03124 581 aa2.9□□□□□ -1.94
NIC96YFR002W SPN1Q06505 410 aaPredicted RBP2.9□□□□□ -1.94
NIC96YFR002W PRS5Q12265 496 aaKnown RBP2.9□□□□□ -1.94
NIC96YFR002W SDH8P38345 138 aa2.9□□□□□ -1.95
NIC96YFR002W STB5P38699 743 aa2.9□□□□□ -1.95
NIC96YFR002W HRD3Q05787 833 aa2.9□□□□□ -1.95
NIC96YFR002W Q0010Q9ZZX9 128 aa2.9□□□□□ -1.95
NIC96YFR002W CBP3P21560 335 aa2.89□□□□□ -1.95
NIC96YFR002W PLC1P32383 869 aa2.89□□□□□ -1.95
NIC96YFR002W PET309P32522 965 aaPredicted RBP2.89□□□□□ -1.95
NIC96YFR002W GDA1P32621 518 aa2.89□□□□□ -1.95
NIC96YFR002W PAF1P38351 445 aa2.89□□□□□ -1.95
NIC96YFR002W EMP65P40085 556 aa2.89□□□□□ -1.95
NIC96YFR002W CYK3Q07533 885 aa2.89□□□□□ -1.95
NIC96YFR002W SLX4Q12098 748 aa2.89□□□□□ -1.95
NIC96YFR002W AHA1Q12449 350 aaKnown RBP2.89□□□□□ -1.95
NIC96YFR002W TFC4P33339 1025 aa2.89□□□□□ -1.95
NIC96YFR002W HOL1P53389 586 aa2.89□□□□□ -1.95
NIC96YFR002W RAD33Q04231 177 aa2.89□□□□□ -1.95
NIC96YFR002W CRT10Q08226 957 aa2.89□□□□□ -1.95
NIC96YFR002W TSC11P40061 1430 aa2.89□□□□□ -1.95
NIC96YFR002W TSR4P25040 408 aa2.88□□□□□ -1.95
NIC96YFR002W PRP45P28004 379 aaPredicted RBP2.88□□□□□ -1.95
NIC96YFR002W GSM1P42950 618 aa2.88□□□□□ -1.95
NIC96YFR002W YML119WQ03208 357 aa2.88□□□□□ -1.95
NIC96YFR002W GEP3Q08622 556 aa2.88□□□□□ -1.95
NIC96YFR002W HOS1Q12214 470 aa2.88□□□□□ -1.95
NIC96YFR002W AMD2P22580 549 aa2.88□□□□□ -1.95
NIC96YFR002W SSP120P39931 234 aaKnown RBP2.88□□□□□ -1.95
NIC96YFR002W YIL092WP40497 633 aa2.88□□□□□ -1.95
NIC96YFR002W CIR2Q08822 631 aa2.88□□□□□ -1.95
NIC96YFR002W DBP10Q12389 995 aaKnown RBP2.88□□□□□ -1.95
NIC96YFR002W KAR1P11927 433 aa2.87□□□□□ -1.95
NIC96YFR002W VPS8P39702 1274 aa2.87□□□□□ -1.95
NIC96YFR002W SNO3P43544 222 aa2.87□□□□□ -1.95
NIC96YFR002W PHM6Q05637 104 aa2.87□□□□□ -1.95
NIC96YFR002W TOP1P04786 769 aa2.87□□□□□ -1.95
NIC96YFR002W PEX14P53112 341 aa2.87□□□□□ -1.95
NIC96YFR002W ERG13P54839 491 aaKnown RBP2.87□□□□□ -1.95
NIC96YFR002W PSF3Q12146 194 aa2.87□□□□□ -1.95
NIC96YFR002W URE2P23202 354 aaKnown RBP2.86□□□□□ -1.95
NIC96YFR002W PUS4P48567 403 aaKnown RBP2.86□□□□□ -1.95
NIC96YFR002W IDP3P53982 420 aaKnown RBP2.86□□□□□ -1.95
NIC96YFR002W MPS1P54199 764 aa2.86□□□□□ -1.95
NIC96YFR002W CHO2P05374 869 aaKnown RBP2.86□□□□□ -1.95
NIC96YFR002W RRP43P25359 394 aaPredicted RBP2.86□□□□□ -1.95
NIC96YFR002W TPO3Q06451 622 aa2.86□□□□□ -1.95
NIC96YFR002W LCB4Q12246 624 aa2.86□□□□□ -1.95
NIC96YFR002W PNO1Q99216 274 aaKnown RBP2.86□□□□□ -1.95
NIC96YFR002W IML1P47170 1584 aa2.86□□□□□ -1.95
NIC96YFR002W USO1P25386 1790 aa2.85□□□□□ -1.95
NIC96YFR002W YMR085WP0CF18 432 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms