RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC19, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC19	YDR201W	DDC1	Q08949	612 aa		4.17	□□□□□ -1.74
SPC19	YDR201W	TAF10	Q12030	206 aa		4.17	□□□□□ -1.74
SPC19	YDR201W	YLL056C	Q12177	298 aa		4.17	□□□□□ -1.74
SPC19	YDR201W	YDR524C-B	Q3E6R4	66 aa		4.17	□□□□□ -1.74
SPC19	YDR201W	YOL087C	Q99247	1116 aa		4.17	□□□□□ -1.74
SPC19	YDR201W	HAP2	P06774	265 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	LEU1	P07264	779 aa	Known RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	IMA3	P0CW40	589 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	IMA4	P0CW41	589 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SPC19	YDR201W	RAD5	P32849	1169 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	SLA2	P33338	968 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	LDH1	P38139	375 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	YBR062C	P38239	180 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	YBP1	P38315	674 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	SOH1	P38633	127 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	DIA4	P38705	446 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	NMD3	P38861	518 aa	Known RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	REV7	P38927	245 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	MND2	P40577	368 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	RRT5	P43607	289 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	GUF1	P46943	645 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	SAE2	P46946	345 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	RFX1	P48743	811 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	PCL10	P53124	433 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	PEX31	P53203	462 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	YNL011C	P53980	444 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	INA17	Q02888	182 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	SND1	Q04007	877 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	MAG2	Q06436	670 aa	Known RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	AAD4	Q07747	329 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	IMA2	Q08295	589 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	APC5	Q08683	685 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	YPL225W	Q08971	146 aa	Known RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	GPM2	Q12008	311 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	NBP2	Q12163	236 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	PKH2	Q12236	1081 aa	Known RBP	4.16	□□□□□ -1.74
SPC19	YDR201W	AVL9	Q12500	764 aa		4.16	□□□□□ -1.74
SPC19	YDR201W	TEF1	P02994	458 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	RIP-Chip
SPC19	YDR201W	RPS31	P05759	152 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	ILS1	P09436	1072 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	HEM1	P09950	548 aa	Predicted RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	SSC1	P0CS90	654 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	PRP16	P15938	1071 aa	Predicted RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	BIO2	P32451	375 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	TKL2	P33315	681 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	MRPL7	P36519	292 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	ETR1	P38071	380 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	YSW1	P38280	609 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	MSC7	P38694	644 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	OTU2	P38747	307 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	BRL1	P38770	471 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	AIM18	P38884	321 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	RAD55	P38953	406 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	MAF1	P41910	395 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	TDA10	P42938	290 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	MNN11	P46985	422 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	TAH11	P47112	604 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	KTR6	P54070	446 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	VPS9	P54787	451 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	ADA2	Q02336	434 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	YML119W	Q03208	357 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	YMR160W	Q03823	816 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	HRD3	Q05787	833 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	ADE13	Q05911	482 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	TDA5	Q06417	326 aa	Known RBP	4.15	□□□□□ -1.75
SPC19	YDR201W	YLR053C	Q12026	108 aa		4.15	□□□□□ -1.75
SPC19	YDR201W	MET16	P18408	261 aa	Predicted RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	CDC20	P26309	610 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	MET4	P32389	672 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	KES1	P35844	434 aa	Known RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	SET3	P36124	751 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	YBR032W	P38223	100 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	YBR053C	P38235	358 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	BIT2	P38346	545 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	RIM4	P38741	713 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	LIN1	P38852	340 aa	Predicted RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	YHR202W	P38887	602 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	PRM9	P39551	298 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	STL1	P39932	569 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	PRK1	P40494	810 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	CDC1	P40986	491 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	SPO74	P45819	413 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	IML2	P47031	731 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	LIA1	P47120	325 aa	Known RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	YGR127W	P53275	312 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	BIO4	P53630	237 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	UBX4	P54730	416 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	SLU7	Q02775	382 aa	Known RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	SHE9	Q04172	456 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	YPQ2	Q06328	317 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	YET3	Q07451	203 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	YDL073W	Q07454	984 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	NOB1	Q08444	459 aa	Known RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	HRT3	Q12347	344 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	EFG1	Q3E705	233 aa	Known RBP	4.14	□□□□□ -1.75
SPC19	YDR201W	NHA1	Q99271	985 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	AI5_ALPHA	Q9ZZX1	630 aa		4.14	□□□□□ -1.75
SPC19	YDR201W	ERR1	P0CX10	437 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms