RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	TAF9	Q05027	157 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	COQ9	Q05779	260 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	ADE13	Q05911	482 aa	Known RBP	3.41	□□□□□ -1.86
PSF1	YDR013W	THI7	Q05998	598 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	DUS4	Q06063	367 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	AAD4	Q07747	329 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
PSF1	YDR013W	SPE3	Q12074	293 aa	Known RBP	3.41	□□□□□ -1.86
PSF1	YDR013W	TY3A-G	Q12173	290 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	SPE4	Q12455	300 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	TRM11	Q12463	433 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	EFG1	Q3E705	233 aa	Known RBP	3.41	□□□□□ -1.86
PSF1	YDR013W	TY3A-I	Q99219	290 aa		3.41	□□□□□ -1.86
PSF1	YDR013W	ADE3	P07245	946 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	MIS1	P09440	975 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	YML002W	P0CF17	737 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	RPL4A	P10664	362 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	PEP5	P12868	1029 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SNA3	P14359	133 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	NMT1	P14743	455 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	CBF1	P17106	351 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SEC14	P24280	304 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	KIN82	P25341	720 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	NPP1	P25353	742 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	YCL068C	P25593	260 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	VBA3	P25594	458 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	YCR015C	P25616	317 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	PYC2	P32327	1180 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	MRS6	P32864	603 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	BUD2	P33314	1104 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	CUE2	P36075	443 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	VBA5	P36172	582 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ETR1	P38071	380 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	HSL7	P38274	827 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SAF1	P38352	637 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	MMS21	P38632	267 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	OTU2	P38747	307 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	PNT1	P38969	423 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	LYS9	P38999	446 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	FLC2	P39719	783 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SAH1	P39954	449 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	ALG5	P40350	334 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ARG2	P40360	574 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	TMA108	P40462	946 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ASG1	P40467	964 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	GVP36	P40531	326 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	CCT7	P42943	550 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	PHO86	P46956	311 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	TRF5	P48561	642 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	RPL4B	P49626	362 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	YGR127W	P53275	312 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	YNL134C	P53912	376 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	YNL108C	P53929	270 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SFB2	P53953	876 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	CDC55	Q00362	526 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ULP1	Q02724	621 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ELP3	Q02908	557 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	ATP25	Q03153	612 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	MUB1	Q03162	620 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	HOT1	Q03213	719 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	TFB3	Q03290	321 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	YDR476C	Q03362	224 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SKY1	Q03656	742 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	SND1	Q04007	877 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	RPN9	Q04062	393 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	TIF35	Q04067	274 aa	Known RBP	3.4	□□□□□ -1.87
PSF1	YDR013W	TAF11	Q04226	346 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	YET3	Q07451	203 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	GIS3	Q12418	502 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ZPS1	Q12512	249 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	PCD1	Q12524	340 aa		3.4	□□□□□ -1.87
PSF1	YDR013W	ENO2	P00925	437 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	RPB4	P20433	221 aa	Predicted RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	ZIP1	P31111	875 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	TPS2	P31688	896 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	DGR2	P32330	852 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	CDC3	P32457	520 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	NIP1	P32497	812 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	RGT1	P32862	1170 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	TIM23	P32897	222 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	HSP78	P33416	811 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	NUP120	P35729	1037 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	SPC42	P36094	363 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	PAM1	P37304	830 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	BSD2	P38356	321 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	RFC3	P38629	340 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	SRP68	P38687	599 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	TRM5	P38793	499 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	BZZ1	P38822	633 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	TDA11	P38854	504 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	AVT2	P39981	480 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	ARB1	P40024	610 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	SIP5	P40210	489 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	PDS1	P40316	373 aa	Predicted RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	ROK1	P45818	564 aa	Predicted RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	ARC1	P46672	376 aa	Known RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	NUT1	P53114	1132 aa		3.39	□□□□□ -1.87
PSF1	YDR013W	YGR283C	P53336	341 aa	Predicted RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	IST1	P53843	298 aa	Predicted RBP	3.39	□□□□□ -1.87
PSF1	YDR013W	RLI1	Q03195	608 aa	Known RBP	3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms