RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C APC5Q08683 685 aa7.02□□□□□ -1.29
TDP1YBR223C TMA46Q12000 345 aaKnown RBP7.02□□□□□ -1.29
TDP1YBR223C LDB17Q12342 491 aa7.02□□□□□ -1.29
TDP1YBR223C GCY1P14065 312 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
TDP1YBR223C VAC17P25591 423 aa7.01□□□□□ -1.29
TDP1YBR223C RIM1P32445 135 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C CTP1P38152 299 aa7.01□□□□□ -1.29
TDP1YBR223C PPE1P38796 400 aa7.01□□□□□ -1.29
TDP1YBR223C YAT2P40017 923 aa7.01□□□□□ -1.29
TDP1YBR223C FIR1P40020 876 aa7.01□□□□□ -1.29
TDP1YBR223C RPM2Q02773 1202 aa7.01□□□□□ -1.29
TDP1YBR223C MUK1Q02866 612 aa7.01□□□□□ -1.29
TDP1YBR223C CDC123Q05791 360 aa7.01□□□□□ -1.29
TDP1YBR223C RCL1Q08096 367 aaPredicted RBP7.01□□□□□ -1.29
TDP1YBR223C SNX3Q08826 162 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C APC9Q12107 265 aa7.01□□□□□ -1.29
TDP1YBR223C YEL077CQ3E7X8 1277 aa7.01□□□□□ -1.29
TDP1YBR223C YPR089WO13585 888 aa7.01□□□□□ -1.29
TDP1YBR223C ENO2P00925 437 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C HVG1P0CE11 249 aa7.01□□□□□ -1.29
TDP1YBR223C KEX2P13134 814 aa7.01□□□□□ -1.29
TDP1YBR223C GFD2P25370 566 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C PMI40P29952 429 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C AST1P35183 429 aa7.01□□□□□ -1.29
TDP1YBR223C APE3P37302 537 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C TDA11P38854 504 aa7.01□□□□□ -1.29
TDP1YBR223C MGS1P40151 587 aa7.01□□□□□ -1.29
TDP1YBR223C HOS4P40480 1083 aa7.01□□□□□ -1.29
TDP1YBR223C MAM33P40513 266 aa7.01□□□□□ -1.29
TDP1YBR223C ALT2P52892 507 aa7.01□□□□□ -1.29
TDP1YBR223C COG2P53271 262 aa7.01□□□□□ -1.29
TDP1YBR223C YNL058CP53947 316 aa7.01□□□□□ -1.29
TDP1YBR223C KTR6P54070 446 aa7.01□□□□□ -1.29
TDP1YBR223C YET2Q04210 160 aa7.01□□□□□ -1.29
TDP1YBR223C YKU80Q04437 629 aa7.01□□□□□ -1.29
TDP1YBR223C RSC2Q06488 889 aa7.01□□□□□ -1.29
TDP1YBR223C MEU1Q07938 337 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
TDP1YBR223C DDC1Q08949 612 aa7.01□□□□□ -1.29
TDP1YBR223C CHS5Q12114 671 aaKnown RBP7.01□□□□□ -1.29
TDP1YBR223C TAF3Q12297 353 aa7.01□□□□□ -1.29
TDP1YBR223C HRT3Q12347 344 aa7.01□□□□□ -1.29
TDP1YBR223C YAK1P14680 807 aa7□□□□□ -1.29
TDP1YBR223C AMD2P22580 549 aa7□□□□□ -1.29
TDP1YBR223C MEF1P25039 761 aa7□□□□□ -1.29
TDP1YBR223C RSA4P25382 515 aaKnown RBP7□□□□□ -1.29
TDP1YBR223C CYS3P31373 394 aaKnown RBP7□□□□□ -1.29
TDP1YBR223C HEM12P32347 362 aaPredicted RBP7□□□□□ -1.29
TDP1YBR223C DAL1P32375 460 aa7□□□□□ -1.29
TDP1YBR223C BUD2P33314 1104 aa7□□□□□ -1.29
TDP1YBR223C YKR078WP36158 585 aaKnown RBP7□□□□□ -1.29
TDP1YBR223C MRPL7P36519 292 aa7□□□□□ -1.29
TDP1YBR223C YBR053CP38235 358 aa7□□□□□ -1.29
TDP1YBR223C BZZ1P38822 633 aa7□□□□□ -1.29
TDP1YBR223C SEC31P38968 1273 aaKnown RBP7□□□□□ -1.29
TDP1YBR223C PRM9P39551 298 aa7□□□□□ -1.29
TDP1YBR223C ATM1P40416 690 aa7□□□□□ -1.29
TDP1YBR223C SKP2P42843 763 aa7□□□□□ -1.29
TDP1YBR223C CCT8P47079 568 aaKnown RBP7□□□□□ -1.29
TDP1YBR223C CST9Q06032 482 aa7□□□□□ -1.29
TDP1YBR223C YIG1Q08956 461 aa7□□□□□ -1.29
TDP1YBR223C ADF1Q2V2Q1 113 aa7□□□□□ -1.29
TDP1YBR223C YMR030W-AQ3E760 96 aa7□□□□□ -1.29
TDP1YBR223C RHO2P06781 192 aa6.99□□□□□ -1.29
TDP1YBR223C HSC82P15108 705 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C DBP1P24784 617 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C GCD11P32481 527 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C SMI1P32566 505 aa6.99□□□□□ -1.29
TDP1YBR223C AIM26P32858 118 aa6.99□□□□□ -1.29
TDP1YBR223C DRE2P36152 348 aa6.99□□□□□ -1.29
TDP1YBR223C SRP68P38687 599 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C FSH1P38777 243 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C YAP1801P38856 637 aa6.99□□□□□ -1.29
TDP1YBR223C MEF2P39677 819 aa6.99□□□□□ -1.29
TDP1YBR223C CCT7P42943 550 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C RPS10BP46784 105 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C YJL132WP47014 750 aa6.99□□□□□ -1.29
TDP1YBR223C TRF5P48561 642 aaKnown RBP6.99□□□□□ -1.29
TDP1YBR223C NMA2P53204 395 aa6.99□□□□□ -1.29
TDP1YBR223C BUD32P53323 261 aa6.99□□□□□ -1.29
TDP1YBR223C STP1Q00947 519 aa6.99□□□□□ -1.29
TDP1YBR223C ENT4Q07872 247 aa6.99□□□□□ -1.29
TDP1YBR223C RPS10AQ08745 105 aaPredicted RBP6.99□□□□□ -1.29
TDP1YBR223C NBP2Q12163 236 aa6.99□□□□□ -1.29
TDP1YBR223C YOR022CQ12204 715 aa6.99□□□□□ -1.29
TDP1YBR223C TPK1P06244 397 aa6.98□□□□□ -1.29
TDP1YBR223C ERG20P08524 352 aaKnown RBP6.98□□□□□ -1.29
TDP1YBR223C URA4P20051 364 aa6.98□□□□□ -1.29
TDP1YBR223C MSH2P25847 964 aa6.98□□□□□ -1.29
TDP1YBR223C ZIP1P31111 875 aa6.98□□□□□ -1.29
TDP1YBR223C GDA1P32621 518 aa6.98□□□□□ -1.29
TDP1YBR223C CSE2P33308 149 aa6.98□□□□□ -1.29
TDP1YBR223C UBX7P38349 436 aa6.98□□□□□ -1.29
TDP1YBR223C YHI9P38765 294 aa6.98□□□□□ -1.29
TDP1YBR223C YEL028WP39989 153 aa6.98□□□□□ -1.29
TDP1YBR223C ASN2P49090 572 aaKnown RBP6.98□□□□□ -1.29
TDP1YBR223C AZR1P50080 613 aa6.98□□□□□ -1.29
TDP1YBR223C CUS2P53830 285 aaPredicted RBP6.98□□□□□ -1.29
TDP1YBR223C YPL062WQ02781 134 aa6.98□□□□□ -1.29
TDP1YBR223C RLI1Q03195 608 aaKnown RBP6.98□□□□□ -1.29
TDP1YBR223C HPT1Q04178 221 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 233.7 ms