RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W MKT1P40850 830 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W NAT1P12945 854 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W YAK1P14680 807 aa0.81□□□□□ -2.28
UTP20YBL004W SRV2P17555 526 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W PEX1P24004 1043 aa0.81□□□□□ -2.28
UTP20YBL004W AFG1P32317 509 aa0.81□□□□□ -2.28
UTP20YBL004W CDC11P32458 415 aa0.81□□□□□ -2.28
UTP20YBL004W HCS1P34243 683 aa0.81□□□□□ -2.28
UTP20YBL004W SOR1P35497 357 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W MNN5P46982 586 aa0.81□□□□□ -2.28
UTP20YBL004W SPC98P53540 846 aa0.81□□□□□ -2.28
UTP20YBL004W MUB1Q03162 620 aa0.81□□□□□ -2.28
UTP20YBL004W SOR2Q07786 357 aa0.81□□□□□ -2.28
UTP20YBL004W EFG1Q3E705 233 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W NOP14Q99207 810 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W HXK2P04807 486 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W MOD5P07884 428 aa0.81□□□□□ -2.28
UTP20YBL004W STI1P15705 589 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
UTP20YBL004W MXR2P25566 168 aa0.81□□□□□ -2.28
UTP20YBL004W DAL3P32459 195 aa0.81□□□□□ -2.28
UTP20YBL004W EAP1P36041 632 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W CTP1P38152 299 aa0.81□□□□□ -2.28
UTP20YBL004W DPH1P40487 425 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W ROK1P45818 564 aaPredicted RBP0.81□□□□□ -2.28
UTP20YBL004W PRM1P53835 661 aa0.81□□□□□ -2.28
UTP20YBL004W ELP3Q02908 557 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W EBS1Q03466 884 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W ERV41Q04651 352 aa0.81□□□□□ -2.28
UTP20YBL004W LAG2Q92325 660 aa0.81□□□□□ -2.28
UTP20YBL004W COQ1P18900 473 aa0.81□□□□□ -2.28
UTP20YBL004W NPP1P25353 742 aa0.81□□□□□ -2.28
UTP20YBL004W REF2P42073 533 aaPredicted RBP0.81□□□□□ -2.28
UTP20YBL004W PEX13P80667 386 aa0.81□□□□□ -2.28
UTP20YBL004W VPS60Q03390 229 aa0.81□□□□□ -2.28
UTP20YBL004W API2Q04413 109 aa0.81□□□□□ -2.28
UTP20YBL004W IPK1Q06667 281 aa0.81□□□□□ -2.28
UTP20YBL004W FCY22Q12119 530 aa0.81□□□□□ -2.28
UTP20YBL004W CCW14O13547 238 aa0.81□□□□□ -2.28
UTP20YBL004W REP1P03871 373 aa0.81□□□□□ -2.28
UTP20YBL004W COX4P04037 155 aa0.81□□□□□ -2.28
UTP20YBL004W UGP1P32861 499 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W SUL1P38359 859 aa0.81□□□□□ -2.28
UTP20YBL004W MNN10P50108 393 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W YGL260WP53056 76 aa0.81□□□□□ -2.28
UTP20YBL004W MPS1P54199 764 aa0.81□□□□□ -2.28
UTP20YBL004W ORC3P54790 616 aa0.81□□□□□ -2.28
UTP20YBL004W NDD1Q08887 554 aa0.81□□□□□ -2.28
UTP20YBL004W NCR1Q12200 1170 aa0.81□□□□□ -2.28
UTP20YBL004W RKM5Q12367 367 aa0.81□□□□□ -2.28
UTP20YBL004W GIS3Q12418 502 aa0.81□□□□□ -2.28
UTP20YBL004W CAR1P00812 333 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W YMR085WP0CF18 432 aa0.81□□□□□ -2.28
UTP20YBL004W RPA135P22138 1203 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W YJR115WP47152 169 aa0.81□□□□□ -2.28
UTP20YBL004W ADE12P80210 433 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W BSC2Q05611 235 aa0.81□□□□□ -2.28
UTP20YBL004W EMG1Q06287 252 aaKnown RBP0.81□□□□□ -2.28
UTP20YBL004W GLO4Q12320 285 aa0.81□□□□□ -2.28
UTP20YBL004W SSE1P32589 693 aaKnown RBP0.8□□□□□ -2.28
UTP20YBL004W SPC29P33419 253 aa0.8□□□□□ -2.28
UTP20YBL004W MSR1P38714 643 aa0.8□□□□□ -2.28
UTP20YBL004W YDR089WP38966 869 aa0.8□□□□□ -2.28
UTP20YBL004W AVT7P40501 490 aa0.8□□□□□ -2.28
UTP20YBL004W BDP1P46678 594 aa0.8□□□□□ -2.28
UTP20YBL004W ATE1P16639 503 aa0.8□□□□□ -2.28
UTP20YBL004W CKA2P19454 339 aa0.8□□□□□ -2.28
UTP20YBL004W LYP1P32487 611 aa0.8□□□□□ -2.28
UTP20YBL004W SEC61P32915 480 aa0.8□□□□□ -2.28
UTP20YBL004W YHR112CP38716 378 aa0.8□□□□□ -2.28
UTP20YBL004W MGS1P40151 587 aa0.8□□□□□ -2.28
UTP20YBL004W YTA6P40328 754 aa0.8□□□□□ -2.28
UTP20YBL004W AIM22P47051 409 aa0.8□□□□□ -2.28
UTP20YBL004W COP1P53622 1201 aaKnown RBP0.8□□□□□ -2.28
UTP20YBL004W VPS16Q03308 798 aa0.8□□□□□ -2.28
UTP20YBL004W YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
UTP20YBL004W GPM2Q12008 311 aa0.8□□□□□ -2.28
UTP20YBL004W ILS1P09436 1072 aaKnown RBP0.8□□□□□ -2.28
UTP20YBL004W SDH4P37298 181 aa0.8□□□□□ -2.28
UTP20YBL004W MGE1P38523 228 aa0.8□□□□□ -2.28
UTP20YBL004W CRG1P38892 291 aaRIP-Chip data0.8□□□□□ -2.28 RIP-Chip
UTP20YBL004W NUP82P40368 713 aa0.8□□□□□ -2.28
UTP20YBL004W RPS10BP46784 105 aaKnown RBP0.8□□□□□ -2.28
UTP20YBL004W YJR124CP47159 448 aa0.8□□□□□ -2.28
UTP20YBL004W GND2P53319 492 aa0.8□□□□□ -2.28
UTP20YBL004W RPS10AQ08745 105 aaPredicted RBP0.8□□□□□ -2.28
UTP20YBL004W HMI1Q12039 706 aa0.8□□□□□ -2.28
UTP20YBL004W NCE102Q12207 173 aaRIP-Chip data0.8□□□□□ -2.28not detected
UTP20YBL004W CYC8P14922 966 aa0.8□□□□□ -2.28
UTP20YBL004W YBR225WP38321 900 aa0.8□□□□□ -2.28
UTP20YBL004W STN1P38960 494 aa0.8□□□□□ -2.28
UTP20YBL004W SSU1P41930 458 aa0.8□□□□□ -2.28
UTP20YBL004W YRB30P53107 440 aaPredicted RBP0.8□□□□□ -2.28
UTP20YBL004W RPS15Q01855 142 aaKnown RBP0.8□□□□□ -2.28
UTP20YBL004W RMD1Q03441 430 aa0.8□□□□□ -2.28
UTP20YBL004W MCA1Q08601 432 aa0.8□□□□□ -2.28
UTP20YBL004W TRE2Q08693 809 aa0.8□□□□□ -2.28
UTP20YBL004W TUP1P16649 713 aa0.8□□□□□ -2.28
UTP20YBL004W SEC2P17065 759 aa0.8□□□□□ -2.28
UTP20YBL004W PBN1P25580 416 aa0.8□□□□□ -2.28
UTP20YBL004W CYS4P32582 507 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 90.9 ms