RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 TcraP01849 138 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Lynx1P0DP60 116 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Fhl1P97447 280 aaKnown RBP9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Zfp248Q640N4 576 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Slc16a4Q8R0M8 500 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 AamdcQ8R0P4 122 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Slamf6Q9ET39 351 aa9.99□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Ighv1-75A0A075B5Y2 117 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 TshbP12656 138 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Defb45Q3V490 66 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Rpl24Q8BP67 157 aaKnown RBP9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Taf15Q8BQ46 557 aaKnown RBP9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Prss29Q99MS4 279 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Q9CX63 252 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Tcf24V9GWT9 166 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 SetxA2AKX3 2646 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 ColqO35348 457 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Sumo2P61957 95 aaKnown RBP9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Hrct1Q9D6B9 109 aa9.98□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Gm12057A0A087WR21 115 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Ighv1-82A0A0G2JEU7 117 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Gm17727E9Q4V7 109 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Lgals6O54891 301 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Sigmar1O55242 223 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Ang2Q64438 145 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Olfr312Q7TRZ9 308 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Gm10295Q8CCF3 114 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Mustn1Q99JI1 82 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Dpm3Q9D1Q4 92 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Sptbn2Q68FG2 2388 aa9.97□□□□□ -0.81
Ssr1-203ENSMUST00000225246 4930447F04RikA2AFR2 126 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Cited2O35740 269 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Ccl25O35903 144 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 P01837 106 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 P18527 97 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Cd69P37217 199 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Gm17334Q8C6U3 126 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 SNORCQ9CXL7 121 aa9.96□□□□□ -0.81
Ssr1-203ENSMUST00000225246 Ighv3-3A0A0A6YWL2 116 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Sap30O88574 220 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 P01812 117 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Rpl32P62911 135 aaKnown RBP9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Khdc1cQ4KL78 166 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Rbmxl2Q9DAE2 385 aaKnown RBP9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Znf580Q9DB38 172 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm26920S4R2A5 56 aa9.96□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Csmd1Q923L3 3564 aa9.95□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv1-9A0A0A6YW37 117 aa9.95□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm16223Q8CBM3 117 aa9.95□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Tep1P97499 2629 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv8-12A0A0G2JDE1 119 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm17430F6RSK3 157 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 P01741 114 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv1-62-3P01754 117 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Spint3Q3UW09 88 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gkn1Q9CR36 201 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 8030423J24RikQ9CX45 142 aa9.94□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Defa37K9J724 93 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Defa5P28312 93 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Fxyd7P59648 80 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Tex26Q0VB26 296 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ss18Q62280 418 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Fam222aQ6PGH4 453 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Igkv20-101-2A0A0G2JDU3 113 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm45717A0A1B0GT68 152 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm5629P06327 117 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Edn3P48299 214 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Hint1P70349 126 aaKnown RBP9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Spink13Q3UTS8 97 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Prr9Q8BV84 116 aa9.93□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Igkv4-57-1A0A075B5M4 119 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Rpl36-ps4A0A140T8U4 117 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Tcte2E9PY37 120 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm10036E9PYL9 178 aaKnown RBP9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Lmo4P61969 165 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Pcp4P63054 62 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Defb20Q30KP3 96 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Prrc2aQ7TSC1 2158 aaKnown RBP9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Nav2E9Q842 2432 aa9.92□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv5-8A0A075B676 92 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 S100a4P07091 101 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ube2d1P61080 147 aaKnown RBP9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Trav3-1Q5R1I8 114 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Mob4Q6PEB6 225 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 BC048562Q80ZQ7 204 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Mrpl36Q99N90 102 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Pradc1Q9D9N8 188 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Brd3osA0A1B0GRB6 84 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Tcrg-C3L7N479 172 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 P03985 172 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Olfr313Q5NC55 308 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Atp6v0e2Q91XE7 81 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Plac1Q9JI83 173 aa9.91□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv1-66A0A075B5X5 117 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Trav4n-4A0A075B615 110 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Ighv8-5A0A0A6YY60 119 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gm44965A0A0N4SVR3 59 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Q4KKZ1 196 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Gpr82Q8BZR0 328 aa9.9□□□□□ -0.82
Ssr1-203ENSMUST00000225246 Q9D8Q6 235 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms