RNA–Protein interactions for RNA: ENSMUST00000214095.1

Ubp1-204, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-204ENSMUST00000214095 Srsf1Q6PDM2 248 aaKnown RBP17.13■□□□□ 0.33
Ubp1-204ENSMUST00000214095 P01794 123 aa17.13■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Edn2P22389 175 aa17.13■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Gkn1Q9CR36 201 aa17.13■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Rpl11Q9CXW4 178 aaKnown RBP17.13■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Smim15Q3UTD9 74 aa17.12■□□□□ 0.33
Ubp1-204ENSMUST00000214095 S100a4P07091 101 aa17.12■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Samd10Q7TST3 202 aa17.12■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Tmem14cQ9CQN6 114 aa17.12■□□□□ 0.33
Ubp1-204ENSMUST00000214095 P01727 129 aa17.11■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Thy1P01831 162 aa17.11■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Fgf6P21658 208 aa17.11■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Mrpl36Q99N90 102 aa17.11■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Erg28Q9ERY9 140 aa17.11■□□□□ 0.33
Ubp1-204ENSMUST00000214095 TcraP01849 138 aa17.1■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Gm5464Q3UY29 175 aa17.1■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Ttc28Q80XJ3 2450 aa17.1■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Gm12845A0A0N4SUM5 588 aa17.1■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Tex26Q0VB26 296 aa17.1■□□□□ 0.33
Ubp1-204ENSMUST00000214095 P01739 132 aa17.09■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Fam208bQ5DTT3 2382 aa17.09■□□□□ 0.33
Ubp1-204ENSMUST00000214095 MturnQ8CGA4 131 aa17.09■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Ighv1-22A0A075B5U7 117 aa17.08■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Ndufa4Q62425 82 aaKnown RBP17.08■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Gm16223Q8CBM3 117 aa17.08■□□□□ 0.33
Ubp1-204ENSMUST00000214095 Lrrk2Q5S006 2527 aa17.08■□□□□ 0.32
Ubp1-204ENSMUST00000214095 TdhQ8K3F7 373 aa17.08■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Chac1Q8R3J5 223 aa17.08■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Gm10521E9PZK0 135 aa17.07■□□□□ 0.32
Ubp1-204ENSMUST00000214095 BlcapP62951 87 aa17.07■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Umad1E0CX23 159 aa17.07■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Pla2g2aP31482 146 aa17.07■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Gm7489Q3UT34 171 aa17.07■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Bsph2Q0Q236 131 aa17.06■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Defa13P50711 93 aa17.05■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Sumo2P61957 95 aaKnown RBP17.05■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Pkd1l2Q7TN88 2461 aa17.05■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Ighv1-75A0A075B5Y2 117 aa17.05■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Gpr82Q8BZR0 328 aa17.05■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Olfr312Q7TRZ9 308 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Tm4sf20Q9CQY8 226 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Trav6-4A0A075B6B4 115 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Sprr3O09116 238 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Ndufa1O35683 70 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Mtatp8P03930 67 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Fxyd7P59648 80 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Htr1dQ61224 374 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Pxt1Q8K459 51 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Slc16a4Q8R0M8 500 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Ormdl2Q9CQZ0 153 aa17.04■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Arhgap32Q811P8 2089 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Hbb-bsA8DUK4 147 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 P01750 117 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Hbb-b1P02088 147 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Dido1Q8C9B9 2256 aaKnown RBP17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Sptan1P16546 2472 aaKnown RBP17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Ighv3-3A0A0A6YWL2 116 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Usmg5Q78IK2 58 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Itpr1P11881 2749 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Sdk1Q3UH53 2193 aa17.03■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Ighv3-8A0A075B5T0 131 aa17.02■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Bak1O08734 209 aa17.02■□□□□ 0.32
Ubp1-204ENSMUST00000214095 P01726 129 aa17.02■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Spcs1Q9D958 161 aa17.02■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Znf580Q9DB38 172 aa17.02■□□□□ 0.32
Ubp1-204ENSMUST00000214095 Igsf23B2RTN2 239 aa17.02■□□□□ 0.31
Ubp1-204ENSMUST00000214095 P01643 108 aa17.02■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm29289A0A087WPY7 166 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm4064A0A087WR82 380 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm10352B2RWR6 380 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Defa34D3Z0J0 93 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm21693J3QK27 380 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Rbmy1a1O35698 380 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Mcrip2Q9CQB2 160 aaKnown RBP17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 P01747 120 aa17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Taf15Q8BQ46 557 aaKnown RBP17.01■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm9925F6T2U3 160 aa17■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm37988J3QM41 62 aa17■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Mrps12O35680 139 aa17■□□□□ 0.31
Ubp1-204ENSMUST00000214095 PerpQ9JK95 193 aa17■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Armcx4E9PWM3 2356 aa17■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Ighv12-3A0A075B5T1 117 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm26602M0QWA4 95 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Lelp1Q9DAE3 120 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Itpr3P70227 2670 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Ighv1-64A0A075B5X3 117 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Tmem262D3Z338 116 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Sdhaf1Q3U276 118 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Col6a4A2AX52 2309 aa16.99■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Igkv4-69A0A0B4J1I6 116 aa16.98■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm17430F6RSK3 157 aa16.98■□□□□ 0.31
Ubp1-204ENSMUST00000214095 P18527 97 aa16.98■□□□□ 0.31
Ubp1-204ENSMUST00000214095 SonQ9QX47 2444 aaKnown RBP16.98■□□□□ 0.31
Ubp1-204ENSMUST00000214095 8030423J24RikQ9CX45 142 aa16.98■□□□□ 0.31
Ubp1-204ENSMUST00000214095 PlaurP35456 327 aa16.97■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Ighv1-50A0A075B5W1 117 aa16.97■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Gm10226O88253 85 aa16.97■□□□□ 0.31
Ubp1-204ENSMUST00000214095 MdfiP70331 251 aa16.97■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Tal2Q62282 108 aa16.97■□□□□ 0.31
Ubp1-204ENSMUST00000214095 Tmem97Q8VD00 176 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms