RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Gsx1P31315 261 aa10.73□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Plac1Q9JI83 173 aa10.73□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Trav19A0A0B4J1K4 119 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gm44965A0A0N4SVR3 59 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gm20481G3UXK4 153 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Cks1brtQ3UNC9 96 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Nhlrc1Q8BR37 401 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gemin7Q9CWY4 129 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Pygo1Q9D0P5 417 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Lama5Q61001 3718 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Akap13E9Q394 2776 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Ighv7-3A0A075B5R2 120 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Trav7n-5A0A075B604 112 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Hist1h1tQ07133 208 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Higd1cQ76I25 96 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gm26566Q8CAC1 153 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Ccl24Q9JKC0 119 aa10.72□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Trank1Q8BV79 2999 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gm6525A0A0A6YW33 106 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Gm6812B1AXU1 112 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 P01812 117 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 PolP10400 120 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 P18527 97 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Cdx4Q07424 282 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Klk15Q8CGR4 254 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Ormdl2Q9CQZ0 153 aa10.71□□□□□ -0.69
Hoxc4-201ENSMUST00000100164 Fam240aJ3QNP9 97 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 AW146154Q3TPQ7 468 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm4763Q8CFJ5 196 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Tac4Q99N14 128 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Srsf9Q9D0B0 222 aaKnown RBP10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Pradc1Q9D9N8 188 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Rif1Q6PR54 2419 aaKnown RBP10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ighv14-2A0A075B5R7 117 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Brd3osA0A1B0GRB6 84 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Tmem262D3Z338 116 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 P18532 116 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Samd5Q3V1H9 173 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm5941Q497P9 117 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Foxi1Q922I5 372 aa10.7□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Trav4n-4A0A075B615 110 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm28539A0A087WSL9 92 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ighv1-77A0A0G2JGS9 117 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Sdhaf1Q3U276 118 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 3100002H09RikQ9CXW6 140 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Tmem219Q9D123 240 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 RhohQ9D3G9 191 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Arpc1aQ9R0Q6 370 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Rs1Q9Z1L4 224 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Dpm2Q9Z324 84 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Cep250Q60952 2414 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Pcnx1Q9QYC1 2344 aa10.69□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ighv1-55A0A075B5W6 117 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm5878E9PUB3 99 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ndufa4Q62425 82 aaKnown RBP10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Olfr312Q7TRZ9 308 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Q9D8Q6 235 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Muc2Q80Z19 2680 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 CadB2RQC6 2225 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 FlnbQ80X90 2602 aaKnown RBP10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ins1P01325 108 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Csn3P06796 181 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Mllt11P97783 90 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Il1f10Q8R459 152 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Wisp2Q9Z0G4 251 aa10.68□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 1700020N15RikL7MTX3 112 aa10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Psmb11Q8BG41 302 aa10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Rnf182Q8C432 247 aa10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 GlrxQ9QUH0 107 aa10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Itpr3P70227 2670 aa10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 AcanQ61282 2132 aaKnown RBP10.67□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ighv14-1A0A075B5R4 117 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ccl11P48298 97 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Xlr5cQ9JJR2 179 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Prrc2aQ7TSC1 2158 aaKnown RBP10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ighv1-4A0A075B5T4 117 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm867A0A1W2P7T4 151 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Esp24A8R0V6 68 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 TgfaP48030 159 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm12888Q3UW77 119 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm1553Q66VB7 94 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Gm5105Q8C6Y9 112 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ndufb3Q9CQZ6 104 aa10.66□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Nbeal1E9PYP2 2688 aa10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Ss18Q62280 418 aa10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 BB014433Q8C5R5 389 aa10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Tmem14cQ9CQN6 114 aa10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Col7a1Q63870 2944 aa10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Sptan1P16546 2472 aaKnown RBP10.65□□□□□ -0.7
Hoxc4-201ENSMUST00000100164 Timm23Q9WTQ8 209 aa10.65□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Ighv12-3A0A075B5T1 117 aa10.64□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Cxcl13O55038 109 aa10.64□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Sumo2P61957 95 aaKnown RBP10.64□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Hif1anQ8BLR9 349 aa10.64□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Epg5Q80TA9 2572 aa10.63□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Ighv1-53A0A075B5W3 117 aa10.63□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Ighv1-9A0A0A6YW37 117 aa10.63□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Igkv4-71A0A0G2JEH0 117 aa10.63□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Lgals6O54891 301 aa10.63□□□□□ -0.71
Hoxc4-201ENSMUST00000100164 Psmb8P28063 276 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 101.1 ms