RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm16223Q8CBM3 117 aa12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 Nbeal1E9PYP2 2688 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv1-4A0A075B5T4 117 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gm26938S4R185 226 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Bahcc1Q3UHR0 2643 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Igkv20-101-2A0A0G2JDU3 113 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 FshbQ60687 130 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Zfp248Q640N4 576 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Taf15Q8BQ46 557 aaKnown RBP12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv1-53A0A075B5W3 117 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 CnfnQ6PCW6 111 aa12.49□□□□□ -0.41
Trim8-201ENSMUST00000026008 Psmg4P0C7N9 123 aa12.48□□□□□ -0.41
Trim8-201ENSMUST00000026008 Prr3Q811B5 190 aaKnown RBP12.48□□□□□ -0.41
Trim8-201ENSMUST00000026008 Igsf23B2RTN2 239 aa12.48□□□□□ -0.41
Trim8-201ENSMUST00000026008 Cela2aP05208 271 aa12.48□□□□□ -0.41
Trim8-201ENSMUST00000026008 H2-DMb1P35737 261 aa12.48□□□□□ -0.41
Trim8-201ENSMUST00000026008 Casp6O08738 276 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Cited2O35740 269 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 SbpP15501 199 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Srsf2Q62093 221 aaKnown RBP12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Arl3Q9WUL7 182 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Tmem238A9JSM3 176 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Lmo4P61969 165 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv5-8A0A075B676 92 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 A730046J19RikA0A1B0GSN8 89 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 H2al2bA9Z055 111 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Smim15Q3UTD9 74 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Mrpl36Q99N90 102 aa12.47□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv1-80A0A075B5Y3 117 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 Trav8-1A0A075B641 109 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv3-4A0A0A6YXF1 117 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 BatfO35284 125 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 Rpl24Q8BP67 157 aaKnown RBP12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 TdhQ8K3F7 373 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 Obox1Q9D350 204 aa12.46□□□□□ -0.41
Trim8-201ENSMUST00000026008 Cks1brtQ3UNC9 96 aa12.46□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ndufa11Q9D8B4 141 aa12.46□□□□□ -0.42
Trim8-201ENSMUST00000026008 Snai3Q9QY31 287 aa12.46□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ighv3-8A0A075B5T0 131 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 TshbP12656 138 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ankhd1E9PUR0 2548 aaKnown RBP12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Itpr3P70227 2670 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Arhgap32Q811P8 2089 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Tmem238lA0A1B0GS74 79 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Esp3J3QN49 87 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 PspnO70300 156 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Rasl11bQ922H7 247 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Igkv4-57-1A0A075B5M4 119 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ighv1-9A0A0A6YW37 117 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm5878E9PUB3 99 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm10521E9PZK0 135 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm26602M0QWA4 95 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Edn2P22389 175 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gata3P23772 443 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Srsf1Q6PDM2 248 aaKnown RBP12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Crip3Q6Q6R3 243 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm17334Q8C6U3 126 aa12.45□□□□□ -0.42
Trim8-201ENSMUST00000026008 4930447F04RikA2AFR2 126 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 RhohQ9D3G9 191 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 Q9D727 114 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm15557A6PWY0 234 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 Bak1O08734 209 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 Adrb3P25962 400 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 TctaQ8VEA7 122 aa12.44□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ins2P01326 110 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 P06334 169 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 P18527 97 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Cdx4Q07424 282 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Tex26Q0VB26 296 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Igkv4-71A0A0G2JEH0 117 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Dpm3Q9D1Q4 92 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Hcfc1Q61191 2045 aaKnown RBP12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Olfr312Q7TRZ9 308 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Prss41Q920S2 322 aa12.43□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm10271F6WY25 52 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Olfr311Q5NC59 308 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gtf2h5Q8K2X8 71 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Nit2Q9JHW2 276 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Trbv13-1A0A0B4J1P8 112 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Brd3osA0A1B0GRB6 84 aa12.42□□□□□ -0.42
Trim8-201ENSMUST00000026008 Socs3O35718 225 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Mob4Q6PEB6 225 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Try10Q792Z1 246 aaKnown RBP12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Tctex1d4Q8CDY7 219 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Slc16a4Q8R0M8 500 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Odf1Q61999 247 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Rs1Q9Z1L4 224 aa12.41□□□□□ -0.42
Trim8-201ENSMUST00000026008 Utp20Q5XG71 2788 aaKnown RBP12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Mrps12O35680 139 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Ndufa1O35683 70 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Trav7-2Q5R1I3 112 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Atxn7l1Q9CZ05 146 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Cxcl14Q9WUQ5 99 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Kmt2bO08550 2713 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm45753A0A1C7CYU8 86 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Sumo2P61957 95 aaKnown RBP12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 BlcapP62951 87 aa12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Hectd1Q69ZR2 2618 aaKnown RBP12.4□□□□□ -0.42
Trim8-201ENSMUST00000026008 Gm12057A0A087WR21 115 aa12.39□□□□□ -0.43
Trim8-201ENSMUST00000026008 Tmem262D3Z338 116 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms