RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tcte2E9PY37 120 aa14.21□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ndufa1O35683 70 aa14.21□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 P01724 129 aa14.21□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Cela2aP05208 271 aa14.21□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Sdk1Q3UH53 2193 aa14.21□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Htr1dQ61224 374 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Spcs1Q9D958 161 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ighv1-22A0A075B5U7 117 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm26602M0QWA4 95 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 TcraP01849 138 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Defa13P50711 93 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ndufa4Q62425 82 aaKnown RBP14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Prss41Q920S2 322 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gkn1Q9CR36 201 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Spink12Q9D256 87 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 PerpQ9JK95 193 aa14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ncor2Q9WU42 2472 aaKnown RBP14.2□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Hbb-bsA8DUK4 147 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Bak1O08734 209 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Hbb-b1P02088 147 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Bsph2Q0Q236 131 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Tctex1d4Q8CDY7 219 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm6040Q4QY32 63 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm16223Q8CBM3 117 aa14.19□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Umad1E0CX23 159 aa14.18□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Mrpl36Q99N90 102 aa14.18□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Mcrip2Q9CQB2 160 aaKnown RBP14.18□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ins2P01326 110 aa14.18□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Tex26Q0VB26 296 aa14.18□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 P01727 129 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 S100a4P07091 101 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Sumo2P61957 95 aaKnown RBP14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Smim15Q3UTD9 74 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ighv1-75A0A075B5Y2 117 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 P01739 132 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Tmem97Q8VD00 176 aa14.17□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 PspnO70300 156 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 SbpP15501 199 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Fxyd7P59648 80 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm12845A0A0N4SUM5 588 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Edn2P22389 175 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Samd10Q7TST3 202 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ormdl2Q9CQZ0 153 aa14.16□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ttc28Q80XJ3 2450 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm29289A0A087WPY7 166 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm4064A0A087WR82 380 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm10352B2RWR6 380 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Gm21693J3QK27 380 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Rbmy1a1O35698 380 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Tal2Q62282 108 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Odf3Q920N1 254 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ighv3-3A0A0A6YWL2 116 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Cox7cP17665 63 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Pla2g2aP31482 146 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Olfr312Q7TRZ9 308 aa14.15□□□□□ -0.14
Shkbp1-201ENSMUST00000003857 Ighv12-3A0A075B5T1 117 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Defa34D3Z0J0 93 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gpr82Q8BZR0 328 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Ociad2Q9D8W7 154 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Znf580Q9DB38 172 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Fam208bQ5DTT3 2382 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 1700067P10RikG3X8U2 183 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Pip4p1Q3TWL2 284 aa14.14□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Dido1Q8C9B9 2256 aaKnown RBP14.13□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Sptbn4E9PX29 2561 aa14.13□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Svep1A2AVA0 3567 aa14.13□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 P18527 97 aa14.13□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 NbeaQ9EPN1 2936 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gm9242J3QNY1 357 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Smim1P0C8K7 78 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Znhit3Q9CQK1 151 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Fam240bJ3QMB3 78 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 P01750 117 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gtf2h5Q8K2X8 71 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Slc16a4Q8R0M8 500 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 8030423J24RikQ9CX45 142 aa14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Rpl11Q9CXW4 178 aaKnown RBP14.12□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Sptan1P16546 2472 aaKnown RBP14.11□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Igkv4-69A0A0B4J1I6 116 aa14.11□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Mrps12O35680 139 aa14.11□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Sprr3O09116 238 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 P01747 120 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Sdhaf1Q3U276 118 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Armcx4E9PWM3 2356 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gm10521E9PZK0 135 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 BlcapP62951 87 aa14.1□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gm17430F6RSK3 157 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Gm5629P06327 117 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Lrrk2Q5S006 2527 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Trav6-4A0A075B6B4 115 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Lgals6O54891 301 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Cox11Q6P8I6 275 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Mustn1Q99JI1 82 aa14.09□□□□□ -0.15
Shkbp1-201ENSMUST00000003857 Pkd1l2Q7TN88 2461 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ighv1-64A0A075B5X3 117 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Brd3osA0A1B0GRB6 84 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Gata3P23772 443 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 MdfiP70331 251 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ovol2Q8CIV7 274 aa14.08□□□□□ -0.16
Shkbp1-201ENSMUST00000003857 Ighv3-8A0A075B5T0 131 aa14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms