RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, human

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01578-205	ENST00000555227	MYCBP2	O75592	4640 aa		0.4	□□□□□ -2.35
LINC01578-205	ENST00000555227	KMT2D	O14686	5537 aa		0.39	□□□□□ -2.35
LINC01578-205	ENST00000555227	LRP1B	Q9NZR2	4599 aa		0.39	□□□□□ -2.35
LINC01578-205	ENST00000555227	STARD9	Q9P2P6	4700 aa		0.39	□□□□□ -2.35
LINC01578-205	ENST00000555227	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	HSPG2	P98160	4391 aa		0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	FLG	P20930	4061 aa	Predicted RBP	0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	APOB	P04114	4563 aa	Known RBP	0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	PKHD1	P08F94	4074 aa		0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	DYNC1H1	Q14204	4646 aa	Known RBP	0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	PKD1	P98161	4303 aa		0.38	□□□□□ -2.35
LINC01578-205	ENST00000555227	SACS	Q9NZJ4	4579 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	DNAH5	Q8TE73	4624 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	LRP1	Q07954	4544 aa	Known RBP	0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	PKHD1L1	Q86WI1	4243 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	FAT3	Q8TDW7	4589 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	FAT2	Q9NYQ8	4349 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	LRP2	P98164	4655 aa		0.37	□□□□□ -2.35
LINC01578-205	ENST00000555227	FAT1	Q14517	4588 aa		0.36	□□□□□ -2.35
LINC01578-205	ENST00000555227	RYR1	P21817	5038 aa		0.35	□□□□□ -2.35
LINC01578-205	ENST00000555227	HYDIN	Q4G0P3	5121 aa		0.35	□□□□□ -2.35
LINC01578-205	ENST00000555227	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.34	□□□□□ -2.35
LINC01578-205	ENST00000555227	FAT4	Q6V0I7	4981 aa		0.34	□□□□□ -2.35
LINC01578-205	ENST00000555227	SPRR2G	Q9BYE4	73 aa		0.34	□□□□□ -2.36
LINC01578-205	ENST00000555227	DNHD1	Q96M86	4753 aa		0.34	□□□□□ -2.36
LINC01578-205	ENST00000555227	LPA	P08519	4548 aa		0.34	□□□□□ -2.36
LINC01578-205	ENST00000555227	TNXB	P22105	4242 aa		0.33	□□□□□ -2.36
LINC01578-205	ENST00000555227	MACF1	Q9UPN3	7388 aa	Known RBP	0.33	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1HL1	P0DM35	61 aa		0.33	□□□□□ -2.36
LINC01578-205	ENST00000555227	KRTAP8-1	Q8IUC2	63 aa		0.33	□□□□□ -2.36
LINC01578-205	ENST00000555227	RYR3	Q15413	4870 aa		0.33	□□□□□ -2.36
LINC01578-205	ENST00000555227	MUC17	Q685J3	4493 aa		0.32	□□□□□ -2.36
LINC01578-205	ENST00000555227	HERC2	O95714	4834 aa		0.31	□□□□□ -2.36
LINC01578-205	ENST00000555227	RYR2	Q92736	4967 aa		0.3	□□□□□ -2.36
LINC01578-205	ENST00000555227	KRTAP19-8	Q3LI54	63 aa		0.3	□□□□□ -2.36
LINC01578-205	ENST00000555227	EPPK1	P58107	5090 aa	Known RBP	0.3	□□□□□ -2.36
LINC01578-205	ENST00000555227	HERC1	Q15751	4861 aa		0.3	□□□□□ -2.36
LINC01578-205	ENST00000555227	ABCA13	Q86UQ4	5058 aa		0.3	□□□□□ -2.36
LINC01578-205	ENST00000555227	SYNE1	Q8NF91	8797 aa	Known RBP	0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1E	P04732	61 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1G	P13640	62 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1H	P80294	61 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	KRTAP19-5	Q3LI72	72 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1L	Q93083	61 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	BIRC6	Q9NR09	4857 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	KIAA1109	Q2LD37	5005 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	HMCN2	Q8NDA2	5059 aa		0.29	□□□□□ -2.36
LINC01578-205	ENST00000555227	MUC2	Q02817	5179 aa		0.28	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT2A	P02795	61 aa		0.28	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1F	P04733	61 aa		0.28	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1X	P80297	61 aa		0.28	□□□□□ -2.36
LINC01578-205	ENST00000555227	MT1A	P04731	61 aa		0.27	□□□□□ -2.37
LINC01578-205	ENST00000555227	KRTAP19-2	Q3LHN2	52 aa		0.27	□□□□□ -2.37
LINC01578-205	ENST00000555227	PCLO	Q9Y6V0	5065 aa		0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	SYNE2	Q8WXH0	6885 aa	Known RBP	0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	MT1B	P07438	61 aa		0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	MT1M	Q8N339	61 aa		0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	UBR4	Q5T4S7	5183 aa		0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	RNF213	Q63HN8	5207 aa		0.26	□□□□□ -2.37
LINC01578-205	ENST00000555227	PRM1	P04553	51 aa		0.25	□□□□□ -2.37
LINC01578-205	ENST00000555227	SPRR2A	P35326	72 aa		0.25	□□□□□ -2.37
LINC01578-205	ENST00000555227	SPRR2F	Q96RM1	72 aa		0.24	□□□□□ -2.37
LINC01578-205	ENST00000555227	FSIP2	Q5CZC0	6907 aa		0.24	□□□□□ -2.37
LINC01578-205	ENST00000555227	SSPO	A2VEC9	5147 aa		0.23	□□□□□ -2.37
LINC01578-205	ENST00000555227	SPRR2D	P22532	72 aa		0.23	□□□□□ -2.37
LINC01578-205	ENST00000555227	SPRR2B	P35325	72 aa		0.23	□□□□□ -2.37
LINC01578-205	ENST00000555227	KRTAP19-7	Q3SYF9	63 aa		0.23	□□□□□ -2.37
LINC01578-205	ENST00000555227	DST	Q03001	7570 aa	Known RBP	0.22	□□□□□ -2.37
LINC01578-205	ENST00000555227	SPRR2E	P22531	72 aa		0.22	□□□□□ -2.37
LINC01578-205	ENST00000555227	KRTAP19-6	Q3LI70	58 aa		0.22	□□□□□ -2.37
LINC01578-205	ENST00000555227	USH2A	O75445	5202 aa		0.21	□□□□□ -2.38
LINC01578-205	ENST00000555227	KRTAP6-1	Q3LI64	71 aa		0.21	□□□□□ -2.38
LINC01578-205	ENST00000555227	KRTAP6-2	Q3LI66	62 aa		0.21	□□□□□ -2.38
LINC01578-205	ENST00000555227	MUC12	Q9UKN1	5478 aa		0.19	□□□□□ -2.38
LINC01578-205	ENST00000555227	NEB	P20929	6669 aa		0.19	□□□□□ -2.38
LINC01578-205	ENST00000555227	MT4	P47944	62 aa		0.17	□□□□□ -2.38
LINC01578-205	ENST00000555227	KRTAP20-2	Q3LI61	65 aa		0.15	□□□□□ -2.39
LINC01578-205	ENST00000555227	KRTAP20-1	Q3LI63	56 aa		0.15	□□□□□ -2.39

Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms