RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ABCC1P33527 1531 aa-1.62□□□□□ -2.67
LSM6-205ENST00000507449 LINC00308Q8TCZ7 52 aa-1.63□□□□□ -2.67
LSM6-205ENST00000507449 LMTK2Q8IWU2 1503 aa-1.63□□□□□ -2.67
LSM6-205ENST00000507449 DCAF1Q9Y4B6 1507 aa-1.64□□□□□ -2.67
LSM6-205ENST00000507449 TMEM167BQ9NRX6 74 aa-1.64□□□□□ -2.67
LSM6-205ENST00000507449 ABCC6O95255 1503 aa-1.65□□□□□ -2.67
LSM6-205ENST00000507449 DDX60Q8IY21 1712 aaKnown RBP-1.65□□□□□ -2.67
LSM6-205ENST00000507449 H3BVH4 76 aa-1.65□□□□□ -2.67
LSM6-205ENST00000507449 DEFB114Q30KQ6 69 aa-1.65□□□□□ -2.67
LSM6-205ENST00000507449 A0A096LPF7 62 aa-1.66□□□□□ -2.68
LSM6-205ENST00000507449 PDCD5O14737 125 aa-1.66□□□□□ -2.68
LSM6-205ENST00000507449 TIAM1Q13009 1591 aa-1.67□□□□□ -2.68
LSM6-205ENST00000507449 RB1CC1Q8TDY2 1594 aa-1.67□□□□□ -2.68
LSM6-205ENST00000507449 H3BSH0 61 aa-1.67□□□□□ -2.68
LSM6-205ENST00000507449 NDUFA1O15239 70 aa-1.68□□□□□ -2.68
LSM6-205ENST00000507449 EFCAB6Q5THR3 1501 aa-1.69□□□□□ -2.68
LSM6-205ENST00000507449 TFF3Q07654 80 aa-1.7□□□□□ -2.68
LSM6-205ENST00000507449 C18orf32Q8TCD1 76 aa-1.7□□□□□ -2.68
LSM6-205ENST00000507449 CFAP74Q9C0B2 1584 aa-1.71□□□□□ -2.68
LSM6-205ENST00000507449 H3BUX3 64 aa-1.71□□□□□ -2.68
LSM6-205ENST00000507449 S100ZQ8WXG8 99 aa-1.72□□□□□ -2.68
LSM6-205ENST00000507449 CCDC18Q5T9S5 1454 aa-1.72□□□□□ -2.68
LSM6-205ENST00000507449 ATXN8Q156A1 80 aa-1.73□□□□□ -2.69
LSM6-205ENST00000507449 SYCP2Q9BX26 1530 aa-1.73□□□□□ -2.69
LSM6-205ENST00000507449 AGLP35573 1532 aa-1.74□□□□□ -2.69
LSM6-205ENST00000507449 A0A087WWC5 75 aa-1.74□□□□□ -2.69
LSM6-205ENST00000507449 K7EMI3 77 aa-1.74□□□□□ -2.69
LSM6-205ENST00000507449 ABCA5Q8WWZ7 1642 aa-1.75□□□□□ -2.69
LSM6-205ENST00000507449 ADCY10Q96PN6 1610 aa-1.75□□□□□ -2.69
LSM6-205ENST00000507449 M0R1W7 72 aa-1.76□□□□□ -2.69
LSM6-205ENST00000507449 ATP7AQ04656 1500 aa-1.77□□□□□ -2.69
LSM6-205ENST00000507449 H0YGX0 51 aa-1.78□□□□□ -2.69
LSM6-205ENST00000507449 SERF2P84101 59 aa-1.78□□□□□ -2.69
LSM6-205ENST00000507449 CLTCL1P53675 1640 aa-1.78□□□□□ -2.69
LSM6-205ENST00000507449 IQGAP1P46940 1657 aa-1.79□□□□□ -2.7
LSM6-205ENST00000507449 DUOX1Q9NRD9 1551 aa-1.8□□□□□ -2.7
LSM6-205ENST00000507449 TOP2AP11388 1531 aaKnown RBP-1.8□□□□□ -2.7
LSM6-205ENST00000507449 GNG13Q9P2W3 67 aa-1.8□□□□□ -2.7
LSM6-205ENST00000507449 Q9Y3F1 56 aa-1.81□□□□□ -2.7
LSM6-205ENST00000507449 ABCA9Q8IUA7 1624 aa-1.81□□□□□ -2.7
LSM6-205ENST00000507449 ABCA8O94911 1581 aa-1.81□□□□□ -2.7
LSM6-205ENST00000507449 UGGT1Q9NYU2 1555 aa-1.81□□□□□ -2.7
LSM6-205ENST00000507449 PRXQ9BXM0 1461 aa-1.82□□□□□ -2.7
LSM6-205ENST00000507449 ABCC8Q09428 1581 aa-1.83□□□□□ -2.7
LSM6-205ENST00000507449 STATHP02808 62 aa-1.83□□□□□ -2.7
LSM6-205ENST00000507449 PLNP26678 52 aa-1.83□□□□□ -2.7
LSM6-205ENST00000507449 HILPDAQ9Y5L2 63 aa-1.83□□□□□ -2.7
LSM6-205ENST00000507449 ABCA10Q8WWZ4 1543 aa-1.84□□□□□ -2.7
LSM6-205ENST00000507449 IGIPA6NJ69 53 aa-1.84□□□□□ -2.7
LSM6-205ENST00000507449 TMEM167AQ8TBQ9 72 aa-1.84□□□□□ -2.7
LSM6-205ENST00000507449 COX14Q96I36 57 aa-1.84□□□□□ -2.7
LSM6-205ENST00000507449 IQGAP3Q86VI3 1631 aa-1.84□□□□□ -2.7
LSM6-205ENST00000507449 RPL39P62891 51 aaKnown RBP-1.85□□□□□ -2.71
LSM6-205ENST00000507449 PRCDQ00LT1 54 aa-1.85□□□□□ -2.71
LSM6-205ENST00000507449 ERICH3Q5RHP9 1530 aa-1.86□□□□□ -2.71
LSM6-205ENST00000507449 LINC01549A6NIU2 74 aa-1.86□□□□□ -2.71
LSM6-205ENST00000507449 RPL39LQ96EH5 51 aaKnown RBP-1.88□□□□□ -2.71
LSM6-205ENST00000507449 UGGT2Q9NYU1 1516 aa-1.89□□□□□ -2.71
LSM6-205ENST00000507449 DEFB108BQ8NET1 73 aa-1.9□□□□□ -2.71
LSM6-205ENST00000507449 MROH2BQ7Z745 1585 aa-1.9□□□□□ -2.71
LSM6-205ENST00000507449 ABCA6Q8N139 1617 aa-1.91□□□□□ -2.72
LSM6-205ENST00000507449 K7EIM0 57 aa-1.92□□□□□ -2.72
LSM6-205ENST00000507449 SAMD9LQ8IVG5 1584 aa-1.93□□□□□ -2.72
LSM6-205ENST00000507449 CPS1P31327 1500 aa-1.93□□□□□ -2.72
LSM6-205ENST00000507449 ARHGAP5-AS1Q96IT6 56 aa-1.95□□□□□ -2.72
LSM6-205ENST00000507449 DEFB108AA8MXU0 73 aa-1.96□□□□□ -2.72
LSM6-205ENST00000507449 SMCO4Q9NRQ5 59 aa-1.96□□□□□ -2.72
LSM6-205ENST00000507449 EFCAB5A4FU69 1503 aa-1.96□□□□□ -2.72
LSM6-205ENST00000507449 IQGAP2Q13576 1575 aa-1.98□□□□□ -2.73
LSM6-205ENST00000507449 SNRPGP15A8MWD9 76 aa-1.99□□□□□ -2.73
LSM6-205ENST00000507449 CMC2Q9NRP2 79 aa-2.05□□□□□ -2.74
LSM6-205ENST00000507449 FANCD2Q9BXW9 1451 aa-2.06□□□□□ -2.74
LSM6-205ENST00000507449 RPL39P5Q59GN2 51 aa-2.06□□□□□ -2.74
LSM6-205ENST00000507449 SNRPGP62308 76 aaKnown RBP-2.1□□□□□ -2.75
LSM6-205ENST00000507449 GCC2Q8IWJ2 1684 aa-2.14□□□□□ -2.75
LSM6-205ENST00000507449 SMIM5Q71RC9 77 aa-2.15□□□□□ -2.75
LSM6-205ENST00000507449 SMIM31A0A1B0GVY4 71 aa-2.3□□□□□ -2.78
LSM6-205ENST00000507449 TOMM5Q8N4H5 51 aa-2.33□□□□□ -2.78
Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms