RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
PALMD-202ENST00000496843 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
PALMD-202ENST00000496843 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
PALMD-202ENST00000496843 PCLOQ9Y6V0 5065 aa1.46□□□□□ -2.17
PALMD-202ENST00000496843 HERC2O95714 4834 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 BIRC6Q9NR09 4857 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 KRTAP9-7A8MTY7 169 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 HECTD4Q9Y4D8 3996 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 FRAS1Q86XX4 4008 aa1.46□□□□□ -2.18
PALMD-202ENST00000496843 MT1MQ8N339 61 aa1.45□□□□□ -2.18
PALMD-202ENST00000496843 LRP1BQ9NZR2 4599 aa1.45□□□□□ -2.18
PALMD-202ENST00000496843 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
PALMD-202ENST00000496843 HERC1Q15751 4861 aa1.44□□□□□ -2.18
PALMD-202ENST00000496843 PKD1P98161 4303 aa1.43□□□□□ -2.18
PALMD-202ENST00000496843 DYNC1H1Q14204 4646 aaKnown RBP1.43□□□□□ -2.18
PALMD-202ENST00000496843 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
PALMD-202ENST00000496843 LCE1EQ5T753 118 aa1.43□□□□□ -2.18
PALMD-202ENST00000496843 LCE1FQ5T754 118 aa1.43□□□□□ -2.18
PALMD-202ENST00000496843 HSPG2P98160 4391 aa1.42□□□□□ -2.18
PALMD-202ENST00000496843 DNAH5Q8TE73 4624 aa1.42□□□□□ -2.18
PALMD-202ENST00000496843 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
PALMD-202ENST00000496843 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
PALMD-202ENST00000496843 MT4P47944 62 aa1.41□□□□□ -2.18
PALMD-202ENST00000496843 DNAH8Q96JB1 4490 aa1.41□□□□□ -2.18
PALMD-202ENST00000496843 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
PALMD-202ENST00000496843 PKHD1P08F94 4074 aa1.39□□□□□ -2.19
PALMD-202ENST00000496843 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
PALMD-202ENST00000496843 KIAA1109Q2LD37 5005 aa1.37□□□□□ -2.19
PALMD-202ENST00000496843 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
PALMD-202ENST00000496843 TNXBP22105 4242 aa1.37□□□□□ -2.19
PALMD-202ENST00000496843 KRTAP9-3Q9BYQ3 159 aa1.37□□□□□ -2.19
PALMD-202ENST00000496843 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
PALMD-202ENST00000496843 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
PALMD-202ENST00000496843 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
PALMD-202ENST00000496843 LRP2P98164 4655 aa1.35□□□□□ -2.19
PALMD-202ENST00000496843 KRTAP5-5Q701N2 237 aaPredicted RBP1.35□□□□□ -2.19
PALMD-202ENST00000496843 KRTAP5-8O75690 187 aa1.33□□□□□ -2.2
PALMD-202ENST00000496843 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
PALMD-202ENST00000496843 KRTAP9-6A8MVA2 160 aa1.31□□□□□ -2.2
PALMD-202ENST00000496843 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
PALMD-202ENST00000496843 KRTAP4-4Q9BYR3 166 aa1.28□□□□□ -2.2
PALMD-202ENST00000496843 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
PALMD-202ENST00000496843 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
PALMD-202ENST00000496843 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
PALMD-202ENST00000496843 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
PALMD-202ENST00000496843 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
PALMD-202ENST00000496843 UBR4Q5T4S7 5183 aa1.24□□□□□ -2.21
PALMD-202ENST00000496843 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
PALMD-202ENST00000496843 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
PALMD-202ENST00000496843 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
PALMD-202ENST00000496843 MACF1Q9UPN3 7388 aaKnown RBP1.18□□□□□ -2.22
PALMD-202ENST00000496843 FAT4Q6V0I7 4981 aa1.18□□□□□ -2.22
PALMD-202ENST00000496843 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
PALMD-202ENST00000496843 KRTAP19-6Q3LI70 58 aa1.16□□□□□ -2.22
PALMD-202ENST00000496843 GPR98Q8WXG9 6306 aa1.14□□□□□ -2.23
PALMD-202ENST00000496843 MUC2Q02817 5179 aa1.14□□□□□ -2.23
PALMD-202ENST00000496843 LPAP08519 4548 aa1.13□□□□□ -2.23
PALMD-202ENST00000496843 FLGP20930 4061 aaPredicted RBP1.13□□□□□ -2.23
PALMD-202ENST00000496843 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
PALMD-202ENST00000496843 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
PALMD-202ENST00000496843 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
PALMD-202ENST00000496843 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
PALMD-202ENST00000496843 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
PALMD-202ENST00000496843 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
PALMD-202ENST00000496843 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
PALMD-202ENST00000496843 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
PALMD-202ENST00000496843 USH2AO75445 5202 aa0.98□□□□□ -2.25
PALMD-202ENST00000496843 NEBP20929 6669 aa0.94□□□□□ -2.26
PALMD-202ENST00000496843 KMT2DO14686 5537 aa0.93□□□□□ -2.26
PALMD-202ENST00000496843 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
PALMD-202ENST00000496843 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
PALMD-202ENST00000496843 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
PALMD-202ENST00000496843 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
PALMD-202ENST00000496843 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
PALMD-202ENST00000496843 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
PALMD-202ENST00000496843 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
PALMD-202ENST00000496843 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 678.5 ms