RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Trav7-6A0A075B640 112 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Igf1P05017 153 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 HrkP62816 92 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 ApohQ01339 345 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Pfn2Q9JJV2 140 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Immp1lQ9CQU8 166 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Cep250Q60952 2414 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ighv1-52A0A0A6YXC3 117 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Hivep3A2A884 2348 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm11110Q3U4K9 109 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Spata46Q4FZF2 204 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Zg16Q8K0C5 167 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Pnrc2Q9CR73 140 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 1700013G24RikQ9DAC6 286 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Cd5lQ9QWK4 352 aa4.61□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Brd3osA0A1B0GRB6 84 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Efnb3O35393 340 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 P01783 136 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 P01790 122 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Trdv4Q5R1A3 115 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Foxf1Q61080 378 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Defb21Q8C5Z4 100 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Defb7Q91V70 71 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Rnf185Q91YT2 192 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Mapk1ip1Q9D7G9 263 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Q9D8L0 127 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 MylkQ6PDN3 1941 aaKnown RBP4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Spsb3Q571F5 354 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 AtraidQ6PGD0 223 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Serp2Q6TAW2 65 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Cbln3Q9JHG0 197 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 PtprfA2A8L5 1898 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Hspg2Q05793 3707 aaKnown RBP4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Plxnd1Q3UH93 1925 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 P01837 106 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 GaptQ8CB93 157 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Polr3kQ9CQZ7 108 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Pip4p2Q9CZX7 257 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Trav21-dv12A0A075B6C4 109 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ighv3-4A0A0A6YXF1 117 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Igkv14-130A0A0G2JF45 117 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Igkv6-15A0A140T8M5 115 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ccl7Q03366 97 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Pygo2Q80V76 405 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 COA4Q8BT51 87 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Lypd3Q91YK8 363 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Myo15bI7HPW8 3033 aa4.6□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 AtmQ62388 3066 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Trav13n-4A0A0G2JG01 110 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm37988J3QM41 62 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Lect2O88803 151 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 ElnP54320 860 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Q91WE4 72 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Csdc2Q91YQ3 154 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Spink12Q9D256 87 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ccpg1osV9GXK1 122 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 MgamB5THE2 1827 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ighv1-18A0A0A6YXN4 117 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Cxcl14Q9WUQ5 99 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 LystP97412 3788 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 TrioQ0KL02 3102 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Trav9n-4A0A075B631 113 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 1700025B11RikA0A087WNZ6 93 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 A0A1Y7VJH8 109 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Mst1P26928 716 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Ang4Q3TMQ6 144 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm10188Q3V432 135 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Rai1Q61818 1889 aa4.59□□□□□ -1.67
Pcdh9-202ENSMUST00000192221 Gm10251J3QPM5 127 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm26602M0QWA4 95 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 LoxP28301 411 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Rmi2Q3UPE3 149 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 9130213A22RikQ3V3T2 120 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm10295Q8CCF3 114 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Timm21Q8CCM6 249 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Dmrtc1c1Q9D410 238 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm2916Q9D9B9 127 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Trav6n-6A0A075B6B2 114 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv8-8A0A0A6YXQ0 119 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Lst1O08843 95 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm5615Q3UW02 101 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ang6Q5GAN0 147 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 F930015N05RikQ8C3A3 210 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gtf3aQ8VHT7 364 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Lypd8Q9D7S0 255 aa4.59□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 TprF6ZDS4 2431 aaKnown RBP4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Trav6-4A0A075B6B4 115 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Mp68P56379 58 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Cox6b1P56391 86 aaKnown RBP4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Defb29Q8BGW9 78 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 4930470P17RikQ9D542 155 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Arid1bE9Q4N7 2244 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Igkv14-126A0A075B5K0 117 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv1-62-1A0A075B5U3 116 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Rnf114Q9ET26 229 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Nup205A0A0J9YUD5 2061 aaKnown RBP4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv5-8A0A075B676 92 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Trav7-1A0A0G2JEV5 112 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Odf3l1Q810P2 275 aa4.58□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Q8VC23 124 aa4.58□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 84.5 ms