RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Hist1h1tQ07133 208 aa11.87□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Tmem88bQ3TYP4 173 aa11.87□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Wfdc2Q9DAU7 174 aa11.87□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Trav14n-2A0A0G2JDF5 121 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 AamdcQ8R0P4 122 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Fam241bQ9D882 120 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Usp9xP70398 2559 aaKnown RBP11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ang2Q64438 145 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ifitm2Q99J93 144 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Tmem89Q9DA04 169 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 E030018B13RikJ3QMS9 113 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Trav7-2Q5R1I3 112 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Rab37Q9JKM7 223 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Rs1Q9Z1L4 224 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Trav14d-1A0A075B6B1 121 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ang4Q3TMQ6 144 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 9230109A22RikQ8BHE6 111 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Hrct1Q9D6B9 109 aa11.86□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ighv8-4A0A0A6YW26 117 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 H2al2bA9Z055 111 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Gm20481G3UXK4 153 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Thy1P01831 162 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Gm5105Q8C6Y9 112 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Oxld1Q9CR10 201 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Klf13Q9JJZ6 289 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 CompQ9R0G6 755 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Lypd1Q8BLC3 141 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Fam24aQ8CF27 98 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 OtorQ9JIE3 128 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ramp1Q9WTJ5 148 aa11.85□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Gm12845A0A0N4SUM5 588 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Minos1Q7TNS2 76 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 ApomQ9Z1R3 190 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Ighv8-8A0A0A6YXQ0 119 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Zmat4Q8BZ94 229 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Zfp119aQ9JIC0 545 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Gm10521E9PZK0 135 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Olfr1199Q8VF94 310 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Bex1Q9R224 128 aa11.84□□□□□ -0.51
Scaf4-201ENSMUST00000039280 Trav6-4A0A075B6B4 115 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm45717A0A1B0GT68 152 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Snrpd3P62320 126 aaKnown RBP11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Crip1P63254 77 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 BtcQ05928 177 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ighv5-6A0A075B5Q0 117 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Cox11Q6P8I6 275 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Sigmar1O55242 223 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Myo15bI7HPW8 3033 aa11.83□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Trav19A0A0B4J1K4 119 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Esp24A8R0V6 68 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Tdgf1P51865 171 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Prss29Q99MS4 279 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 P0C913 63 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Pde6hP61249 83 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ovol2Q8CIV7 274 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ttc28Q80XJ3 2450 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 P06334 169 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Olfr745Q7TRL9 328 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Atp6v0bQ91V37 205 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gtsf1lQ9CWD0 151 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Col4a2P08122 1707 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Usmg5Q78IK2 58 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 3110018I06RikQ9CXS0 120 aa11.82□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm9958Q8C9U4 106 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 PolP10400 120 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 PpdpfQ9CR37 115 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Cxcl14Q9WUQ5 99 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Col5a1O88207 1838 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Hbb-bsA8DUK4 147 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 P01896 185 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Hbb-b1P02088 147 aa11.81□□□□□ -0.52
Scaf4-201ENSMUST00000039280 BC107364E9Q5A2 140 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Spock3Q8BKV0 436 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 P01724 129 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Muc15Q8C6Z1 331 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ighv1-80A0A075B5Y3 117 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 P01727 129 aa11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Srsf1Q6PDM2 248 aaKnown RBP11.8□□□□□ -0.52
Scaf4-201ENSMUST00000039280 AspmQ8CJ27 3122 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Pla2g2aP31482 146 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm94Q3V2D2 93 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Pgpep1Q9ESW8 209 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Nit2Q9JHW2 276 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm15294V9GXA7 121 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ifitm10Q8BR26 201 aa11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ranbp2Q9ERU9 3053 aaKnown RBP11.79□□□□□ -0.52
Scaf4-201ENSMUST00000039280 KprpB2RUR4 657 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm10604Q3V0X7 143 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Rbfox3Q8BIF2 374 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm21060J3KMU4 56 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 CrxO54751 299 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm1553Q66VB7 94 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Chac1Q8R3J5 223 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Fbxl15Q91W61 300 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Gm26602M0QWA4 95 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Ighv1-62-3P01754 117 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Olfr317Q5NCD6 327 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 CrygcQ61597 174 aa11.78□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Hspe1Q64433 102 aaKnown RBP11.77□□□□□ -0.52
Scaf4-201ENSMUST00000039280 Mrpl36Q99N90 102 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 92.9 ms