RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tanc1Q0VGY8 1856 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Igkv20-101-2A0A0G2JDU3 113 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Tpsg1Q9QUL7 311 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Bdp1Q571C7 2467 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 MylkQ6PDN3 1941 aaKnown RBP8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01674 108 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 GhrhP16043 103 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Colca2F8VPY8 239 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Clec5aQ9R007 190 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Cep250Q60952 2414 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Lypd8Q9D7S0 255 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Iglc1A0A0G2JE99 106 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01843 105 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Znrd1Q791N7 123 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Ighv2-6A0A075B6A7 116 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Igkv6-15A0A140T8M5 115 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm20499D3Z4G5 72 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P04942 107 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Tmem88bQ3TYP4 173 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Lyg1Q9D7Q0 197 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01812 117 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm15294V9GXA7 121 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Ntf4Q80VU4 209 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 B230307C23RikQ8BLB2 64 aa8.05□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Plxnd1Q3UH93 1925 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 B1ARW8 110 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 NpyP57774 97 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Minos1Q7TNS2 76 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Mpv17l2Q8VIK2 200 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 FancmQ8BGE5 2021 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 ApomQ9Z1R3 190 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Trav4d-3A0A075B625 110 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Rpl32P62911 135 aaKnown RBP8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Loxl1P97873 607 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Atp6v0e1Q9CQD8 81 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Iglv1A0A075B663 117 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Igkv4-70A0A0B4J1I5 116 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Fam216bQ8CC14 138 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Armcx4E9PWM3 2356 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 1700084M14RikB1AT01 78 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01756 117 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01757 117 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Stpg1Q9D2F5 341 aa8.04□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Msrb2Q78J03 175 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Defa21Q8C1P2 93 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Pip4p2Q9CZX7 257 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Ighv1-49A0A0A6YWX2 117 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Mlst8Q9DCJ1 326 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Col4a5Q63ZW6 1691 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Inafm2A0A1L1STD6 152 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Lynx1P0DP60 116 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 7420426K07RikQ3UX66 186 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Igkv4-53A0A0G2JFC6 119 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Igsf23B2RTN2 239 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Atp5g3P56384 141 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Atp5g1Q9CR84 136 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Defa27F2Z403 93 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Lamtor3O88653 124 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm10295Q8CCF3 114 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 CtrlQ9ER05 264 aa8.03□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Zfhx2Q2MHN3 2562 aa8.02□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Cryba4Q9JJV0 196 aa8.02□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Ly6c1P0CW02 131 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Morn5Q9DAI9 170 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Tmem258P61166 79 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Znf740Q6NZQ6 180 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Olfr311Q5NC59 308 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Trbv30A0A0B4J1P1 111 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gatd1Q8BFQ8 220 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Eml5Q8BQM8 1977 aa8.02□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Spink1P09036 80 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Il19Q8CJ70 176 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 5730522E02RikQ5SP45 163 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Lgals4Q8K419 326 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Rnf183Q8QZS5 190 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Tmem131O70472 1877 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 MsmbO08540 113 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Defb33Q30KN3 62 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Cacna1gQ5SUF7 2381 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 PkdrejQ9Z0T6 2126 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 AcacaQ5SWU9 2345 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Smim20D3Z7Q2 69 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Foxc1Q61572 553 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Spink10Q8CAC8 162 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Kif26aQ52KG5 1881 aa8.01□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Frem1Q684R7 2191 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Q08AU9 97 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 3110082J24RikF6Z6Z2 108 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P01741 114 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Cd24P24807 76 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Cd99Q8VCN6 175 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Gm28539A0A087WSL9 92 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Tmem243B2RVB9 118 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ube2e1P52482 193 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 4933414I15RikQ9D4D5 133 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Med12A2AGH6 2190 aa8□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ighv3-8A0A075B5T0 131 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Ndufa1O35683 70 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 P01837 106 aa7.99□□□□□ -1.13
Ubr1-201ENSMUST00000028728 Rbmy1bQ60990 380 aa7.99□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms