RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
PAX6-259ENST00000639916 SPINK1P00995 79 aa5.06□□□□□ -1.6
PAX6-259ENST00000639916 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
PAX6-259ENST00000639916 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
PAX6-259ENST00000639916 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
PAX6-259ENST00000639916 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
PAX6-259ENST00000639916 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
PAX6-259ENST00000639916 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
PAX6-259ENST00000639916 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
PAX6-259ENST00000639916 FAT1Q14517 4588 aa5.01□□□□□ -1.61
PAX6-259ENST00000639916 A0A1B0GVY2 172 aa5□□□□□ -1.61
PAX6-259ENST00000639916 SMR3BP02814 79 aaPredicted RBP5□□□□□ -1.61
PAX6-259ENST00000639916 A0A1B0GU33 70 aa4.99□□□□□ -1.61
PAX6-259ENST00000639916 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
PAX6-259ENST00000639916 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
PAX6-259ENST00000639916 TPRXLQ17RH7 258 aa4.96□□□□□ -1.61
PAX6-259ENST00000639916 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
PAX6-259ENST00000639916 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
PAX6-259ENST00000639916 K7ERS5 55 aa4.95□□□□□ -1.62
PAX6-259ENST00000639916 Q8N1X5 172 aa4.94□□□□□ -1.62
PAX6-259ENST00000639916 HSPG2P98160 4391 aa4.92□□□□□ -1.62
PAX6-259ENST00000639916 RYR1P21817 5038 aa4.9□□□□□ -1.62
PAX6-259ENST00000639916 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.62
PAX6-259ENST00000639916 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
PAX6-259ENST00000639916 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
PAX6-259ENST00000639916 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
PAX6-259ENST00000639916 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
PAX6-259ENST00000639916 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
PAX6-259ENST00000639916 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
PAX6-259ENST00000639916 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
PAX6-259ENST00000639916 RPS29P62273 56 aaKnown RBP4.85□□□□□ -1.63
PAX6-259ENST00000639916 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
PAX6-259ENST00000639916 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.63
PAX6-259ENST00000639916 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
PAX6-259ENST00000639916 KRTAP17-1Q9BYP8 105 aa4.82□□□□□ -1.64
PAX6-259ENST00000639916 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
PAX6-259ENST00000639916 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
PAX6-259ENST00000639916 HERC2O95714 4834 aa4.79□□□□□ -1.64
PAX6-259ENST00000639916 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
PAX6-259ENST00000639916 Q5VSD8 79 aa4.77□□□□□ -1.65
PAX6-259ENST00000639916 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
PAX6-259ENST00000639916 TNXBP22105 4242 aa4.76□□□□□ -1.65
PAX6-259ENST00000639916 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
PAX6-259ENST00000639916 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
PAX6-259ENST00000639916 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
PAX6-259ENST00000639916 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
PAX6-259ENST00000639916 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
PAX6-259ENST00000639916 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
PAX6-259ENST00000639916 A0A0D9SG42 100 aa4.72□□□□□ -1.65
PAX6-259ENST00000639916 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
PAX6-259ENST00000639916 HERC1Q15751 4861 aa4.71□□□□□ -1.66
PAX6-259ENST00000639916 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
PAX6-259ENST00000639916 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
PAX6-259ENST00000639916 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
PAX6-259ENST00000639916 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
PAX6-259ENST00000639916 S4R3F8 94 aa4.62□□□□□ -1.67
PAX6-259ENST00000639916 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
PAX6-259ENST00000639916 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
PAX6-259ENST00000639916 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
PAX6-259ENST00000639916 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
PAX6-259ENST00000639916 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
PAX6-259ENST00000639916 LPAP08519 4548 aa4.5□□□□□ -1.69
PAX6-259ENST00000639916 LRP2P98164 4655 aa4.48□□□□□ -1.69
PAX6-259ENST00000639916 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
PAX6-259ENST00000639916 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.7
PAX6-259ENST00000639916 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
PAX6-259ENST00000639916 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
PAX6-259ENST00000639916 MUC2Q02817 5179 aa4.43□□□□□ -1.7
PAX6-259ENST00000639916 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
PAX6-259ENST00000639916 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
PAX6-259ENST00000639916 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
PAX6-259ENST00000639916 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
PAX6-259ENST00000639916 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
PAX6-259ENST00000639916 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
PAX6-259ENST00000639916 M0QZ58 72 aa4.28□□□□□ -1.72
PAX6-259ENST00000639916 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
PAX6-259ENST00000639916 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
PAX6-259ENST00000639916 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
PAX6-259ENST00000639916 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
PAX6-259ENST00000639916 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
PAX6-259ENST00000639916 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
PAX6-259ENST00000639916 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
PAX6-259ENST00000639916 R4GN34 69 aa4.08□□□□□ -1.76
PAX6-259ENST00000639916 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
PAX6-259ENST00000639916 INE1O15225 51 aa4.03□□□□□ -1.76
PAX6-259ENST00000639916 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
PAX6-259ENST00000639916 M0R2T5 61 aa3.89□□□□□ -1.79
PAX6-259ENST00000639916 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
PAX6-259ENST00000639916 MT1HP80294 61 aa3.87□□□□□ -1.79
PAX6-259ENST00000639916 TNP1P09430 55 aa3.85□□□□□ -1.79
PAX6-259ENST00000639916 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
PAX6-259ENST00000639916 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
PAX6-259ENST00000639916 SPRR2GQ9BYE4 73 aa3.77□□□□□ -1.81
PAX6-259ENST00000639916 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
PAX6-259ENST00000639916 MT2AP02795 61 aa3.76□□□□□ -1.81
PAX6-259ENST00000639916 MT1FP04733 61 aa3.75□□□□□ -1.81
PAX6-259ENST00000639916 USH2AO75445 5202 aa3.74□□□□□ -1.81
PAX6-259ENST00000639916 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
PAX6-259ENST00000639916 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
PAX6-259ENST00000639916 MT1BP07438 61 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms