RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PSMB2P49721 201 aa4.29□□□□□ -1.72
PTP4A1-207ENST00000639568 A0A1B0GW54 56 aa4.28□□□□□ -1.72
PTP4A1-207ENST00000639568 COX6CP09669 75 aa4.27□□□□□ -1.73
PTP4A1-207ENST00000639568 NREPQ16612 68 aa4.27□□□□□ -1.73
PTP4A1-207ENST00000639568 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
PTP4A1-207ENST00000639568 H0YAA0 97 aa4.26□□□□□ -1.73
PTP4A1-207ENST00000639568 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
PTP4A1-207ENST00000639568 CXCL6P80162 114 aa4.25□□□□□ -1.73
PTP4A1-207ENST00000639568 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-207ENST00000639568 COX8AP10176 69 aa4.23□□□□□ -1.73
PTP4A1-207ENST00000639568 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
PTP4A1-207ENST00000639568 CEND1Q8N111 149 aa4.23□□□□□ -1.73
PTP4A1-207ENST00000639568 HIST3H2BBQ8N257 126 aa4.23□□□□□ -1.73
PTP4A1-207ENST00000639568 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
PTP4A1-207ENST00000639568 CASC2Q6XLA1 102 aa4.21□□□□□ -1.74
PTP4A1-207ENST00000639568 DLEU1O43261 78 aa4.2□□□□□ -1.74
PTP4A1-207ENST00000639568 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
PTP4A1-207ENST00000639568 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
PTP4A1-207ENST00000639568 R4GN34 69 aa4.2□□□□□ -1.74
PTP4A1-207ENST00000639568 BAALC-AS2P0C853 105 aa4.19□□□□□ -1.74
PTP4A1-207ENST00000639568 A0A087WVE0 104 aa4.18□□□□□ -1.74
PTP4A1-207ENST00000639568 NDUFC1O43677 76 aa4.18□□□□□ -1.74
PTP4A1-207ENST00000639568 HIGD1BQ9P298 99 aa4.18□□□□□ -1.74
PTP4A1-207ENST00000639568 LOC110117498A0A087WWA1 95 aa4.17□□□□□ -1.74
PTP4A1-207ENST00000639568 JMJD7-PLA2G4BH0Y9G9 81 aa4.16□□□□□ -1.74
PTP4A1-207ENST00000639568 C14orf144Q96I85 54 aa4.15□□□□□ -1.75
PTP4A1-207ENST00000639568 FXYD2P54710 66 aa4.14□□□□□ -1.75
PTP4A1-207ENST00000639568 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
PTP4A1-207ENST00000639568 HIST1H2BLQ99880 126 aa4.14□□□□□ -1.75
PTP4A1-207ENST00000639568 SCGB1C2P0DMR2 95 aa4.13□□□□□ -1.75
PTP4A1-207ENST00000639568 M0QZ58 72 aa4.12□□□□□ -1.75
PTP4A1-207ENST00000639568 BPY2O14599 106 aa4.12□□□□□ -1.75
PTP4A1-207ENST00000639568 S100A2P29034 98 aa4.12□□□□□ -1.75
PTP4A1-207ENST00000639568 K7ERJ3 54 aa4.11□□□□□ -1.75
PTP4A1-207ENST00000639568 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
PTP4A1-207ENST00000639568 C14orf132Q9NPU4 83 aa4.1□□□□□ -1.75
PTP4A1-207ENST00000639568 MT1EP04732 61 aa4.09□□□□□ -1.75
PTP4A1-207ENST00000639568 Q8N9L7 120 aa4.09□□□□□ -1.75
PTP4A1-207ENST00000639568 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
PTP4A1-207ENST00000639568 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
PTP4A1-207ENST00000639568 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
PTP4A1-207ENST00000639568 MT1GP13640 62 aa4.04□□□□□ -1.76
PTP4A1-207ENST00000639568 NAA38Q9BRA0 125 aaKnown RBP4.03□□□□□ -1.76
PTP4A1-207ENST00000639568 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
PTP4A1-207ENST00000639568 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
PTP4A1-207ENST00000639568 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
PTP4A1-207ENST00000639568 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
PTP4A1-207ENST00000639568 P0C880 135 aa4.01□□□□□ -1.77
PTP4A1-207ENST00000639568 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
PTP4A1-207ENST00000639568 BATFQ16520 125 aa3.99□□□□□ -1.77
PTP4A1-207ENST00000639568 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
PTP4A1-207ENST00000639568 K7EP34 96 aa3.98□□□□□ -1.77
PTP4A1-207ENST00000639568 HSD52Q0P140 79 aa3.97□□□□□ -1.77
PTP4A1-207ENST00000639568 ACYP1P07311 99 aa3.95□□□□□ -1.78
PTP4A1-207ENST00000639568 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
PTP4A1-207ENST00000639568 MT1MQ8N339 61 aa3.94□□□□□ -1.78
PTP4A1-207ENST00000639568 MT-ATP8P03928 68 aa3.92□□□□□ -1.78
PTP4A1-207ENST00000639568 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
PTP4A1-207ENST00000639568 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
PTP4A1-207ENST00000639568 S100A6P06703 90 aa3.9□□□□□ -1.79
PTP4A1-207ENST00000639568 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
PTP4A1-207ENST00000639568 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
PTP4A1-207ENST00000639568 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
PTP4A1-207ENST00000639568 S100A1P23297 94 aa3.89□□□□□ -1.79
PTP4A1-207ENST00000639568 MT3P25713 68 aa3.87□□□□□ -1.79
PTP4A1-207ENST00000639568 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
PTP4A1-207ENST00000639568 A0A1W2PPM0 123 aa3.85□□□□□ -1.79
PTP4A1-207ENST00000639568 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
PTP4A1-207ENST00000639568 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
PTP4A1-207ENST00000639568 TSTD3H0UI37 97 aa3.8□□□□□ -1.8
PTP4A1-207ENST00000639568 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
PTP4A1-207ENST00000639568 MT1LQ93083 61 aa3.8□□□□□ -1.8
PTP4A1-207ENST00000639568 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
PTP4A1-207ENST00000639568 UBL5Q9BZL1 73 aa3.78□□□□□ -1.8
PTP4A1-207ENST00000639568 A0A0D9SG42 100 aa3.75□□□□□ -1.81
PTP4A1-207ENST00000639568 SPCS1Q9Y6A9 102 aa3.72□□□□□ -1.81
PTP4A1-207ENST00000639568 H3BT86 120 aa3.7□□□□□ -1.82
PTP4A1-207ENST00000639568 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
PTP4A1-207ENST00000639568 ATOX1O00244 68 aa3.69□□□□□ -1.82
PTP4A1-207ENST00000639568 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
PTP4A1-207ENST00000639568 H0Y9P7 68 aa3.67□□□□□ -1.82
PTP4A1-207ENST00000639568 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
PTP4A1-207ENST00000639568 UQCRQO14949 82 aa3.62□□□□□ -1.83
PTP4A1-207ENST00000639568 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PTP4A1-207ENST00000639568 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
PTP4A1-207ENST00000639568 M0R143 59 aa3.59□□□□□ -1.83
PTP4A1-207ENST00000639568 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
PTP4A1-207ENST00000639568 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
PTP4A1-207ENST00000639568 PYY3Q5JQD4 70 aa3.55□□□□□ -1.84
PTP4A1-207ENST00000639568 TAX1BP3O14907 124 aa3.54□□□□□ -1.84
PTP4A1-207ENST00000639568 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
PTP4A1-207ENST00000639568 SEC61GP60059 68 aa3.51□□□□□ -1.85
PTP4A1-207ENST00000639568 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
PTP4A1-207ENST00000639568 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
PTP4A1-207ENST00000639568 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
PTP4A1-207ENST00000639568 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
PTP4A1-207ENST00000639568 MP68P56378 58 aa3.46□□□□□ -1.86
PTP4A1-207ENST00000639568 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
PTP4A1-207ENST00000639568 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
PTP4A1-207ENST00000639568 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms