RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 LORP23490 312 aaPredicted RBP2.94□□□□□ -1.94
TCF4-285ENST00000637239 KRTAP10-6P60371 365 aaPredicted RBP2.94□□□□□ -1.94
TCF4-285ENST00000637239 DNAH1Q9P2D7 4330 aa2.9□□□□□ -1.94
TCF4-285ENST00000637239 DNHD1Q96M86 4753 aa2.84□□□□□ -1.95
TCF4-285ENST00000637239 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
TCF4-285ENST00000637239 KRTAP3-3Q9BYR6 98 aa2.83□□□□□ -1.96
TCF4-285ENST00000637239 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
TCF4-285ENST00000637239 DNAH11Q96DT5 4516 aa2.81□□□□□ -1.96
TCF4-285ENST00000637239 FRAS1Q86XX4 4008 aa2.8□□□□□ -1.96
TCF4-285ENST00000637239 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
TCF4-285ENST00000637239 DNAH9Q9NYC9 4486 aa2.79□□□□□ -1.96
TCF4-285ENST00000637239 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
TCF4-285ENST00000637239 DNAH3Q8TD57 4116 aa2.77□□□□□ -1.97
TCF4-285ENST00000637239 MT1HP80294 61 aa2.77□□□□□ -1.97
TCF4-285ENST00000637239 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
TCF4-285ENST00000637239 ANK2Q01484 3957 aa2.76□□□□□ -1.97
TCF4-285ENST00000637239 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
TCF4-285ENST00000637239 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
TCF4-285ENST00000637239 DNAH2Q9P225 4427 aa2.75□□□□□ -1.97
TCF4-285ENST00000637239 KMT2AQ03164 3969 aa2.74□□□□□ -1.97
TCF4-285ENST00000637239 LYSTQ99698 3801 aa2.73□□□□□ -1.97
TCF4-285ENST00000637239 DNAH5Q8TE73 4624 aa2.73□□□□□ -1.97
TCF4-285ENST00000637239 CMYA5Q8N3K9 4069 aa2.73□□□□□ -1.97
TCF4-285ENST00000637239 KRTAP10-5P60370 271 aa2.71□□□□□ -1.97
TCF4-285ENST00000637239 SPRR2EP22531 72 aa2.71□□□□□ -1.98
TCF4-285ENST00000637239 SPRR2BP35325 72 aa2.71□□□□□ -1.98
TCF4-285ENST00000637239 SPRR2AP35326 72 aa2.71□□□□□ -1.98
TCF4-285ENST00000637239 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.98
TCF4-285ENST00000637239 PCLOQ9Y6V0 5065 aa2.7□□□□□ -1.98
TCF4-285ENST00000637239 VPS13BQ7Z7G8 4022 aa2.7□□□□□ -1.98
TCF4-285ENST00000637239 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
TCF4-285ENST00000637239 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
TCF4-285ENST00000637239 SPRR2DP22532 72 aa2.65□□□□□ -1.99
TCF4-285ENST00000637239 VPS13DQ5THJ4 4388 aa2.64□□□□□ -1.99
TCF4-285ENST00000637239 MT2AP02795 61 aa2.64□□□□□ -1.99
TCF4-285ENST00000637239 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
TCF4-285ENST00000637239 DYNC1H1Q14204 4646 aaKnown RBP2.62□□□□□ -1.99
TCF4-285ENST00000637239 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
TCF4-285ENST00000637239 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
TCF4-285ENST00000637239 FAT2Q9NYQ8 4349 aa2.6□□□□□ -1.99
TCF4-285ENST00000637239 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
TCF4-285ENST00000637239 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
TCF4-285ENST00000637239 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -2
TCF4-285ENST00000637239 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -2
TCF4-285ENST00000637239 LRP1BQ9NZR2 4599 aa2.58□□□□□ -2
TCF4-285ENST00000637239 LCE2BO14633 110 aa2.57□□□□□ -2
TCF4-285ENST00000637239 LCE2DQ5TA82 110 aaPredicted RBP2.57□□□□□ -2
TCF4-285ENST00000637239 DNAH17Q9UFH2 4485 aa2.56□□□□□ -2
TCF4-285ENST00000637239 MT1FP04733 61 aa2.55□□□□□ -2
TCF4-285ENST00000637239 KRTAP17-1Q9BYP8 105 aa2.55□□□□□ -2
TCF4-285ENST00000637239 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
TCF4-285ENST00000637239 STARD9Q9P2P6 4700 aa2.54□□□□□ -2
TCF4-285ENST00000637239 RYR3Q15413 4870 aa2.54□□□□□ -2
TCF4-285ENST00000637239 DNAH8Q96JB1 4490 aa2.53□□□□□ -2
TCF4-285ENST00000637239 RYR2Q92736 4967 aa2.53□□□□□ -2
TCF4-285ENST00000637239 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
TCF4-285ENST00000637239 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
TCF4-285ENST00000637239 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
TCF4-285ENST00000637239 HERC2O95714 4834 aa2.49□□□□□ -2.01
TCF4-285ENST00000637239 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
TCF4-285ENST00000637239 LCE3CQ5T5A8 94 aa2.46□□□□□ -2.02
TCF4-285ENST00000637239 FAT1Q14517 4588 aa2.45□□□□□ -2.02
TCF4-285ENST00000637239 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
TCF4-285ENST00000637239 LCE2CQ5TA81 110 aa2.44□□□□□ -2.02
TCF4-285ENST00000637239 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
TCF4-285ENST00000637239 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
TCF4-285ENST00000637239 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.03
TCF4-285ENST00000637239 KRTAP9-2Q9BYQ4 174 aa2.39□□□□□ -2.03
TCF4-285ENST00000637239 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
TCF4-285ENST00000637239 KRTAP9-6A0A140TA67 174 aa2.38□□□□□ -2.03
TCF4-285ENST00000637239 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
TCF4-285ENST00000637239 HYDINQ4G0P3 5121 aa2.37□□□□□ -2.03
TCF4-285ENST00000637239 HERC1Q15751 4861 aa2.37□□□□□ -2.03
TCF4-285ENST00000637239 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
TCF4-285ENST00000637239 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
TCF4-285ENST00000637239 HSPG2P98160 4391 aa2.35□□□□□ -2.03
TCF4-285ENST00000637239 PKD1P98161 4303 aa2.35□□□□□ -2.03
TCF4-285ENST00000637239 MYCBP2O75592 4640 aa2.35□□□□□ -2.03
TCF4-285ENST00000637239 MT1GP13640 62 aa2.34□□□□□ -2.03
TCF4-285ENST00000637239 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.04
TCF4-285ENST00000637239 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
TCF4-285ENST00000637239 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
TCF4-285ENST00000637239 LCE2AQ5TA79 106 aaPredicted RBP2.31□□□□□ -2.04
TCF4-285ENST00000637239 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
TCF4-285ENST00000637239 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
TCF4-285ENST00000637239 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
TCF4-285ENST00000637239 MT1BP07438 61 aa2.27□□□□□ -2.05
TCF4-285ENST00000637239 MT1XP80297 61 aa2.27□□□□□ -2.05
TCF4-285ENST00000637239 MT4P47944 62 aa2.27□□□□□ -2.05
TCF4-285ENST00000637239 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
TCF4-285ENST00000637239 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
TCF4-285ENST00000637239 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
TCF4-285ENST00000637239 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
TCF4-285ENST00000637239 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
TCF4-285ENST00000637239 TNXBP22105 4242 aa2.21□□□□□ -2.06
TCF4-285ENST00000637239 LRP2P98164 4655 aa2.2□□□□□ -2.06
TCF4-285ENST00000637239 KRTAP4-8A0A0G2JLE6 195 aa2.2□□□□□ -2.06
TCF4-285ENST00000637239 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
TCF4-285ENST00000637239 LPAP08519 4548 aa2.2□□□□□ -2.06
TCF4-285ENST00000637239 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms