RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
ARHGEF4-218ENST00000636987 FAT1Q14517 4588 aa5.59□□□□□ -1.51
ARHGEF4-218ENST00000636987 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
ARHGEF4-218ENST00000636987 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
ARHGEF4-218ENST00000636987 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
ARHGEF4-218ENST00000636987 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
ARHGEF4-218ENST00000636987 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
ARHGEF4-218ENST00000636987 Q5VSD8 79 aa5.51□□□□□ -1.53
ARHGEF4-218ENST00000636987 APOBP04114 4563 aaKnown RBP5.51□□□□□ -1.53
ARHGEF4-218ENST00000636987 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
ARHGEF4-218ENST00000636987 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
ARHGEF4-218ENST00000636987 RYR1P21817 5038 aa5.44□□□□□ -1.54
ARHGEF4-218ENST00000636987 VPS13BQ7Z7G8 4022 aa5.43□□□□□ -1.54
ARHGEF4-218ENST00000636987 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
ARHGEF4-218ENST00000636987 HSPG2P98160 4391 aa5.42□□□□□ -1.54
ARHGEF4-218ENST00000636987 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
ARHGEF4-218ENST00000636987 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.55
ARHGEF4-218ENST00000636987 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
ARHGEF4-218ENST00000636987 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
ARHGEF4-218ENST00000636987 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
ARHGEF4-218ENST00000636987 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
ARHGEF4-218ENST00000636987 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
ARHGEF4-218ENST00000636987 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
ARHGEF4-218ENST00000636987 HERC2O95714 4834 aa5.31□□□□□ -1.56
ARHGEF4-218ENST00000636987 S4R3F8 94 aa5.3□□□□□ -1.56
ARHGEF4-218ENST00000636987 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
ARHGEF4-218ENST00000636987 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
ARHGEF4-218ENST00000636987 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
ARHGEF4-218ENST00000636987 KRTAP12-2P59991 146 aa5.19□□□□□ -1.58
ARHGEF4-218ENST00000636987 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
ARHGEF4-218ENST00000636987 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
ARHGEF4-218ENST00000636987 FAT3Q8TDW7 4589 aa5.17□□□□□ -1.58
ARHGEF4-218ENST00000636987 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
ARHGEF4-218ENST00000636987 MT1HL1P0DM35 61 aa5.16□□□□□ -1.58
ARHGEF4-218ENST00000636987 HERC1Q15751 4861 aa5.14□□□□□ -1.59
ARHGEF4-218ENST00000636987 M0QZ58 72 aa5.11□□□□□ -1.59
ARHGEF4-218ENST00000636987 R4GN34 69 aa5.1□□□□□ -1.59
ARHGEF4-218ENST00000636987 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
ARHGEF4-218ENST00000636987 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
ARHGEF4-218ENST00000636987 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
ARHGEF4-218ENST00000636987 TNXBP22105 4242 aa5.06□□□□□ -1.6
ARHGEF4-218ENST00000636987 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
ARHGEF4-218ENST00000636987 CAMK2N1Q7Z7J9 78 aa5.01□□□□□ -1.61
ARHGEF4-218ENST00000636987 XP32Q5T750 250 aa4.98□□□□□ -1.61
ARHGEF4-218ENST00000636987 LRP2P98164 4655 aa4.98□□□□□ -1.61
ARHGEF4-218ENST00000636987 LPAP08519 4548 aa4.95□□□□□ -1.62
ARHGEF4-218ENST00000636987 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
ARHGEF4-218ENST00000636987 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
ARHGEF4-218ENST00000636987 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
ARHGEF4-218ENST00000636987 MUC2Q02817 5179 aa4.83□□□□□ -1.64
ARHGEF4-218ENST00000636987 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
ARHGEF4-218ENST00000636987 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
ARHGEF4-218ENST00000636987 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
ARHGEF4-218ENST00000636987 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
ARHGEF4-218ENST00000636987 TNP1P09430 55 aa4.66□□□□□ -1.66
ARHGEF4-218ENST00000636987 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
ARHGEF4-218ENST00000636987 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
ARHGEF4-218ENST00000636987 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
ARHGEF4-218ENST00000636987 M0R2T5 61 aa4.63□□□□□ -1.67
ARHGEF4-218ENST00000636987 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
ARHGEF4-218ENST00000636987 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
ARHGEF4-218ENST00000636987 MT1HP80294 61 aa4.37□□□□□ -1.71
ARHGEF4-218ENST00000636987 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
ARHGEF4-218ENST00000636987 INE1O15225 51 aa4.29□□□□□ -1.72
ARHGEF4-218ENST00000636987 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
ARHGEF4-218ENST00000636987 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
ARHGEF4-218ENST00000636987 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
ARHGEF4-218ENST00000636987 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
ARHGEF4-218ENST00000636987 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
ARHGEF4-218ENST00000636987 USH2AO75445 5202 aa4.19□□□□□ -1.74
ARHGEF4-218ENST00000636987 MT2AP02795 61 aa4.17□□□□□ -1.74
ARHGEF4-218ENST00000636987 MT1FP04733 61 aa4.16□□□□□ -1.74
ARHGEF4-218ENST00000636987 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
ARHGEF4-218ENST00000636987 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
ARHGEF4-218ENST00000636987 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
ARHGEF4-218ENST00000636987 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
ARHGEF4-218ENST00000636987 KRTAP10-12P60413 245 aa4□□□□□ -1.77
ARHGEF4-218ENST00000636987 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
ARHGEF4-218ENST00000636987 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
ARHGEF4-218ENST00000636987 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
ARHGEF4-218ENST00000636987 LCE2BO14633 110 aa3.96□□□□□ -1.78
ARHGEF4-218ENST00000636987 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
ARHGEF4-218ENST00000636987 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
ARHGEF4-218ENST00000636987 MT1BP07438 61 aa3.86□□□□□ -1.79
ARHGEF4-218ENST00000636987 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
ARHGEF4-218ENST00000636987 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
ARHGEF4-218ENST00000636987 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
ARHGEF4-218ENST00000636987 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
ARHGEF4-218ENST00000636987 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
ARHGEF4-218ENST00000636987 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
ARHGEF4-218ENST00000636987 MT1XP80297 61 aa3.76□□□□□ -1.81
ARHGEF4-218ENST00000636987 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
ARHGEF4-218ENST00000636987 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
ARHGEF4-218ENST00000636987 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
ARHGEF4-218ENST00000636987 KMT2DO14686 5537 aa3.73□□□□□ -1.81
ARHGEF4-218ENST00000636987 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
ARHGEF4-218ENST00000636987 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
ARHGEF4-218ENST00000636987 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
ARHGEF4-218ENST00000636987 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
ARHGEF4-218ENST00000636987 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms