RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 S4R3F8 94 aa4.38□□□□□ -1.71
CHD2-226ENST00000636881 SACSQ9NZJ4 4579 aa4.37□□□□□ -1.71
CHD2-226ENST00000636881 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
CHD2-226ENST00000636881 FAT2Q9NYQ8 4349 aa4.34□□□□□ -1.72
CHD2-226ENST00000636881 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
CHD2-226ENST00000636881 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
CHD2-226ENST00000636881 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
CHD2-226ENST00000636881 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
CHD2-226ENST00000636881 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
CHD2-226ENST00000636881 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
CHD2-226ENST00000636881 LCE2BO14633 110 aa4.25□□□□□ -1.73
CHD2-226ENST00000636881 XP32Q5T750 250 aa4.23□□□□□ -1.73
CHD2-226ENST00000636881 FAT1Q14517 4588 aa4.23□□□□□ -1.73
CHD2-226ENST00000636881 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
CHD2-226ENST00000636881 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
CHD2-226ENST00000636881 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
CHD2-226ENST00000636881 M0QZ58 72 aa4.2□□□□□ -1.74
CHD2-226ENST00000636881 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
CHD2-226ENST00000636881 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
CHD2-226ENST00000636881 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
CHD2-226ENST00000636881 KRTAP21-3Q3LHN1 58 aa4.16□□□□□ -1.74
CHD2-226ENST00000636881 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
CHD2-226ENST00000636881 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
CHD2-226ENST00000636881 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
CHD2-226ENST00000636881 HSPG2P98160 4391 aa4.12□□□□□ -1.75
CHD2-226ENST00000636881 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
CHD2-226ENST00000636881 R4GN34 69 aa4.09□□□□□ -1.75
CHD2-226ENST00000636881 Q5VSD8 79 aa4.07□□□□□ -1.76
CHD2-226ENST00000636881 TNXBP22105 4242 aa4.06□□□□□ -1.76
CHD2-226ENST00000636881 MYCBP2O75592 4640 aa4.06□□□□□ -1.76
CHD2-226ENST00000636881 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
CHD2-226ENST00000636881 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
CHD2-226ENST00000636881 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
CHD2-226ENST00000636881 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
CHD2-226ENST00000636881 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
CHD2-226ENST00000636881 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
CHD2-226ENST00000636881 LPAP08519 4548 aa3.92□□□□□ -1.78
CHD2-226ENST00000636881 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.78
CHD2-226ENST00000636881 LRP2P98164 4655 aa3.9□□□□□ -1.78
CHD2-226ENST00000636881 RYR2Q92736 4967 aa3.88□□□□□ -1.79
CHD2-226ENST00000636881 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
CHD2-226ENST00000636881 SEC61BP60468 96 aaKnown RBP3.84□□□□□ -1.79
CHD2-226ENST00000636881 RYR1P21817 5038 aa3.8□□□□□ -1.8
CHD2-226ENST00000636881 TNP1P09430 55 aa3.79□□□□□ -1.8
CHD2-226ENST00000636881 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
CHD2-226ENST00000636881 KIAA1109Q2LD37 5005 aa3.72□□□□□ -1.81
CHD2-226ENST00000636881 MUC17Q685J3 4493 aa3.71□□□□□ -1.81
CHD2-226ENST00000636881 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
CHD2-226ENST00000636881 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
CHD2-226ENST00000636881 RYR3Q15413 4870 aa3.7□□□□□ -1.82
CHD2-226ENST00000636881 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.82
CHD2-226ENST00000636881 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
CHD2-226ENST00000636881 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
CHD2-226ENST00000636881 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
CHD2-226ENST00000636881 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
CHD2-226ENST00000636881 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
CHD2-226ENST00000636881 HERC1Q15751 4861 aa3.52□□□□□ -1.85
CHD2-226ENST00000636881 INE1O15225 51 aa3.5□□□□□ -1.85
CHD2-226ENST00000636881 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
CHD2-226ENST00000636881 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
CHD2-226ENST00000636881 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
CHD2-226ENST00000636881 M0R2T5 61 aa3.44□□□□□ -1.86
CHD2-226ENST00000636881 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
CHD2-226ENST00000636881 MUC2Q02817 5179 aa3.4□□□□□ -1.87
CHD2-226ENST00000636881 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
CHD2-226ENST00000636881 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
CHD2-226ENST00000636881 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
CHD2-226ENST00000636881 HERC2O95714 4834 aa3.36□□□□□ -1.87
CHD2-226ENST00000636881 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
CHD2-226ENST00000636881 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
CHD2-226ENST00000636881 MT1FP04733 61 aa3.31□□□□□ -1.88
CHD2-226ENST00000636881 MT2AP02795 61 aa3.3□□□□□ -1.88
CHD2-226ENST00000636881 MT1HP80294 61 aa3.28□□□□□ -1.88
CHD2-226ENST00000636881 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
CHD2-226ENST00000636881 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
CHD2-226ENST00000636881 MT1XP80297 61 aa3.27□□□□□ -1.89
CHD2-226ENST00000636881 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
CHD2-226ENST00000636881 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
CHD2-226ENST00000636881 MT1BP07438 61 aa3.24□□□□□ -1.89
CHD2-226ENST00000636881 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
CHD2-226ENST00000636881 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
CHD2-226ENST00000636881 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.9
CHD2-226ENST00000636881 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
CHD2-226ENST00000636881 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
CHD2-226ENST00000636881 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
CHD2-226ENST00000636881 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
CHD2-226ENST00000636881 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
CHD2-226ENST00000636881 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
CHD2-226ENST00000636881 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
CHD2-226ENST00000636881 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
CHD2-226ENST00000636881 KMT2DO14686 5537 aa2.9□□□□□ -1.94
CHD2-226ENST00000636881 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
CHD2-226ENST00000636881 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
CHD2-226ENST00000636881 KRTAP9-6A0A140TA67 174 aa2.88□□□□□ -1.95
CHD2-226ENST00000636881 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms