RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PKD1P98161 4303 aa4□□□□□ -1.77
PKP4-217ENST00000628904 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
PKP4-217ENST00000628904 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
PKP4-217ENST00000628904 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
PKP4-217ENST00000628904 XP32Q5T750 250 aa3.97□□□□□ -1.77
PKP4-217ENST00000628904 A8MUU9 505 aa3.96□□□□□ -1.77
PKP4-217ENST00000628904 A0A1B0GU33 70 aa3.96□□□□□ -1.78
PKP4-217ENST00000628904 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.78
PKP4-217ENST00000628904 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
PKP4-217ENST00000628904 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
PKP4-217ENST00000628904 K7ERS5 55 aa3.95□□□□□ -1.78
PKP4-217ENST00000628904 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
PKP4-217ENST00000628904 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
PKP4-217ENST00000628904 CSAG1Q6PB30 78 aa3.93□□□□□ -1.78
PKP4-217ENST00000628904 S4R3F8 94 aa3.92□□□□□ -1.78
PKP4-217ENST00000628904 LRP2P98164 4655 aa3.92□□□□□ -1.78
PKP4-217ENST00000628904 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
PKP4-217ENST00000628904 KRTAP3-1Q9BYR8 98 aa3.92□□□□□ -1.78
PKP4-217ENST00000628904 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
PKP4-217ENST00000628904 LPAP08519 4548 aa3.88□□□□□ -1.79
PKP4-217ENST00000628904 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
PKP4-217ENST00000628904 HSPG2P98160 4391 aa3.87□□□□□ -1.79
PKP4-217ENST00000628904 LCE2BO14633 110 aa3.86□□□□□ -1.79
PKP4-217ENST00000628904 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
PKP4-217ENST00000628904 MUC2Q02817 5179 aa3.84□□□□□ -1.8
PKP4-217ENST00000628904 P0C880 135 aa3.83□□□□□ -1.8
PKP4-217ENST00000628904 H0YAA0 97 aa3.83□□□□□ -1.8
PKP4-217ENST00000628904 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
PKP4-217ENST00000628904 HERC2O95714 4834 aa3.82□□□□□ -1.8
PKP4-217ENST00000628904 M0R2T5 61 aa3.82□□□□□ -1.8
PKP4-217ENST00000628904 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
PKP4-217ENST00000628904 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
PKP4-217ENST00000628904 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
PKP4-217ENST00000628904 M0QZ58 72 aa3.79□□□□□ -1.8
PKP4-217ENST00000628904 R4GN34 69 aa3.79□□□□□ -1.8
PKP4-217ENST00000628904 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PKP4-217ENST00000628904 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
PKP4-217ENST00000628904 HERC1Q15751 4861 aa3.73□□□□□ -1.81
PKP4-217ENST00000628904 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
PKP4-217ENST00000628904 ROMO1P60602 79 aa3.71□□□□□ -1.82
PKP4-217ENST00000628904 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
PKP4-217ENST00000628904 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
PKP4-217ENST00000628904 TNXBP22105 4242 aa3.69□□□□□ -1.82
PKP4-217ENST00000628904 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
PKP4-217ENST00000628904 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
PKP4-217ENST00000628904 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
PKP4-217ENST00000628904 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
PKP4-217ENST00000628904 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
PKP4-217ENST00000628904 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
PKP4-217ENST00000628904 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
PKP4-217ENST00000628904 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
PKP4-217ENST00000628904 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
PKP4-217ENST00000628904 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
PKP4-217ENST00000628904 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
PKP4-217ENST00000628904 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
PKP4-217ENST00000628904 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
PKP4-217ENST00000628904 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
PKP4-217ENST00000628904 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
PKP4-217ENST00000628904 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
PKP4-217ENST00000628904 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
PKP4-217ENST00000628904 TNP1P09430 55 aa3.33□□□□□ -1.88
PKP4-217ENST00000628904 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
PKP4-217ENST00000628904 USH2AO75445 5202 aa3.31□□□□□ -1.88
PKP4-217ENST00000628904 MT1HP80294 61 aa3.29□□□□□ -1.88
PKP4-217ENST00000628904 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
PKP4-217ENST00000628904 MT1FP04733 61 aa3.24□□□□□ -1.89
PKP4-217ENST00000628904 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
PKP4-217ENST00000628904 MT2AP02795 61 aa3.21□□□□□ -1.89
PKP4-217ENST00000628904 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
PKP4-217ENST00000628904 KMT2DO14686 5537 aa3.15□□□□□ -1.91
PKP4-217ENST00000628904 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PKP4-217ENST00000628904 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
PKP4-217ENST00000628904 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
PKP4-217ENST00000628904 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
PKP4-217ENST00000628904 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
PKP4-217ENST00000628904 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
PKP4-217ENST00000628904 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
PKP4-217ENST00000628904 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
PKP4-217ENST00000628904 MT1BP07438 61 aa3.01□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
PKP4-217ENST00000628904 MT1XP80297 61 aa2.97□□□□□ -1.93
PKP4-217ENST00000628904 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
PKP4-217ENST00000628904 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
PKP4-217ENST00000628904 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
PKP4-217ENST00000628904 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
PKP4-217ENST00000628904 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
PKP4-217ENST00000628904 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
PKP4-217ENST00000628904 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
PKP4-217ENST00000628904 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
PKP4-217ENST00000628904 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.96
PKP4-217ENST00000628904 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
PKP4-217ENST00000628904 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
PKP4-217ENST00000628904 INE1O15225 51 aa2.81□□□□□ -1.96
PKP4-217ENST00000628904 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
PKP4-217ENST00000628904 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
PKP4-217ENST00000628904 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms