RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 TPRXLQ17RH7 258 aa10.65□□□□□ -0.7
UBAP1-204ENST00000625521 KTN1-AS1Q86SY8 53 aa10.62□□□□□ -0.71
UBAP1-204ENST00000625521 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
UBAP1-204ENST00000625521 SPATA8Q6RVD6 105 aa10.62□□□□□ -0.71
UBAP1-204ENST00000625521 UQCR11O14957 56 aa10.57□□□□□ -0.72
UBAP1-204ENST00000625521 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
UBAP1-204ENST00000625521 SEC61GP60059 68 aa10.43□□□□□ -0.74
UBAP1-204ENST00000625521 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
UBAP1-204ENST00000625521 LPAP08519 4548 aa10.39□□□□□ -0.75
UBAP1-204ENST00000625521 LRP2P98164 4655 aa10.37□□□□□ -0.75
UBAP1-204ENST00000625521 RBM12B-AS1Q9P1G2 102 aa10.31□□□□□ -0.76
UBAP1-204ENST00000625521 H0YAA0 97 aa10.29□□□□□ -0.76
UBAP1-204ENST00000625521 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
UBAP1-204ENST00000625521 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
UBAP1-204ENST00000625521 A0A1B0GU33 70 aa10.24□□□□□ -0.77
UBAP1-204ENST00000625521 H1FX-AS1Q4G0G2 97 aa10.23□□□□□ -0.77
UBAP1-204ENST00000625521 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
UBAP1-204ENST00000625521 PRAC1Q96KF2 57 aa10.21□□□□□ -0.77
UBAP1-204ENST00000625521 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
UBAP1-204ENST00000625521 HERC1Q15751 4861 aa10.1□□□□□ -0.79
UBAP1-204ENST00000625521 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
UBAP1-204ENST00000625521 HMCN2Q8NDA2 5059 aa10.06□□□□□ -0.8
UBAP1-204ENST00000625521 KRTAP10-6P60371 365 aaPredicted RBP10.05□□□□□ -0.8
UBAP1-204ENST00000625521 S4R3F8 94 aa10.04□□□□□ -0.8
UBAP1-204ENST00000625521 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
UBAP1-204ENST00000625521 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
UBAP1-204ENST00000625521 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
UBAP1-204ENST00000625521 KRTAP13-4Q3LI77 160 aa9.92□□□□□ -0.82
UBAP1-204ENST00000625521 P0C880 135 aa9.84□□□□□ -0.83
UBAP1-204ENST00000625521 K7ERS5 55 aa9.8□□□□□ -0.84
UBAP1-204ENST00000625521 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
UBAP1-204ENST00000625521 KRTAP19-2Q3LHN2 52 aa9.78□□□□□ -0.84
UBAP1-204ENST00000625521 A0A0D9SG42 100 aa9.74□□□□□ -0.85
UBAP1-204ENST00000625521 MUC2Q02817 5179 aa9.72□□□□□ -0.85
UBAP1-204ENST00000625521 KRTAP25-1Q3LHN0 102 aa9.7□□□□□ -0.86
UBAP1-204ENST00000625521 ROMO1P60602 79 aa9.63□□□□□ -0.87
UBAP1-204ENST00000625521 CRIPTQ9P021 101 aa9.57□□□□□ -0.88
UBAP1-204ENST00000625521 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
UBAP1-204ENST00000625521 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
UBAP1-204ENST00000625521 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
UBAP1-204ENST00000625521 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
UBAP1-204ENST00000625521 M0QZ58 72 aa9.5□□□□□ -0.89
UBAP1-204ENST00000625521 RNF213Q63HN8 5207 aa9.49□□□□□ -0.89
UBAP1-204ENST00000625521 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
UBAP1-204ENST00000625521 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
UBAP1-204ENST00000625521 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
UBAP1-204ENST00000625521 C10orf95Q9H7T3 257 aa9.29□□□□□ -0.92
UBAP1-204ENST00000625521 MT1HP80294 61 aa9.28□□□□□ -0.92
UBAP1-204ENST00000625521 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.92
UBAP1-204ENST00000625521 R4GN34 69 aa9.27□□□□□ -0.92
UBAP1-204ENST00000625521 M0R2T5 61 aa9.23□□□□□ -0.93
UBAP1-204ENST00000625521 KRTAP9-8Q9BYQ0 159 aa8.97□□□□□ -0.97
UBAP1-204ENST00000625521 MT2AP02795 61 aa8.96□□□□□ -0.98
UBAP1-204ENST00000625521 MT1FP04733 61 aa8.91□□□□□ -0.98
UBAP1-204ENST00000625521 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
UBAP1-204ENST00000625521 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
UBAP1-204ENST00000625521 KRTAP15-1Q3LI76 137 aa8.83□□□□□ -1
UBAP1-204ENST00000625521 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
UBAP1-204ENST00000625521 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
UBAP1-204ENST00000625521 CAMK2N1Q7Z7J9 78 aa8.76□□□□□ -1.01
UBAP1-204ENST00000625521 H3BS24 57 aa8.73□□□□□ -1.01
UBAP1-204ENST00000625521 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
UBAP1-204ENST00000625521 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
UBAP1-204ENST00000625521 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
UBAP1-204ENST00000625521 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
UBAP1-204ENST00000625521 NDUFAF8A1L188 74 aa8.48□□□□□ -1.05
UBAP1-204ENST00000625521 MT1BP07438 61 aa8.47□□□□□ -1.05
UBAP1-204ENST00000625521 TNP1P09430 55 aa8.44□□□□□ -1.06
UBAP1-204ENST00000625521 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
UBAP1-204ENST00000625521 LCE2BO14633 110 aa8.36□□□□□ -1.07
UBAP1-204ENST00000625521 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
UBAP1-204ENST00000625521 MT1XP80297 61 aa8.24□□□□□ -1.09
UBAP1-204ENST00000625521 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
UBAP1-204ENST00000625521 USH2AO75445 5202 aa8.09□□□□□ -1.11
UBAP1-204ENST00000625521 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
UBAP1-204ENST00000625521 SPRR5A0A1B0GTR4 108 aa8.02□□□□□ -1.13
UBAP1-204ENST00000625521 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
UBAP1-204ENST00000625521 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
UBAP1-204ENST00000625521 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
UBAP1-204ENST00000625521 KRTAP10-12P60413 245 aa7.9□□□□□ -1.15
UBAP1-204ENST00000625521 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.15
UBAP1-204ENST00000625521 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
UBAP1-204ENST00000625521 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
UBAP1-204ENST00000625521 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
UBAP1-204ENST00000625521 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
UBAP1-204ENST00000625521 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
UBAP1-204ENST00000625521 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
UBAP1-204ENST00000625521 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
UBAP1-204ENST00000625521 KMT2DO14686 5537 aa7.49□□□□□ -1.21
UBAP1-204ENST00000625521 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
UBAP1-204ENST00000625521 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
UBAP1-204ENST00000625521 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
UBAP1-204ENST00000625521 KRTAP19-7Q3SYF9 63 aa7.35□□□□□ -1.23
UBAP1-204ENST00000625521 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
UBAP1-204ENST00000625521 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
UBAP1-204ENST00000625521 MT1EP04732 61 aa7.22□□□□□ -1.25
UBAP1-204ENST00000625521 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
UBAP1-204ENST00000625521 MT1LQ93083 61 aa7.1□□□□□ -1.27
UBAP1-204ENST00000625521 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
UBAP1-204ENST00000625521 KRTAP9-6A8MVA2 160 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms