RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.29
RNU6-538P-201ENST00000622329 LAMA5O15230 3695 aa0.71□□□□□ -2.3
RNU6-538P-201ENST00000622329 ACACBO00763 2458 aa0.71□□□□□ -2.3
RNU6-538P-201ENST00000622329 SPG11Q96JI7 2443 aa0.7□□□□□ -2.3
RNU6-538P-201ENST00000622329 FAT4Q6V0I7 4981 aa0.69□□□□□ -2.3
RNU6-538P-201ENST00000622329 KALRNO60229 2985 aa0.69□□□□□ -2.3
RNU6-538P-201ENST00000622329 DNAH1Q9P2D7 4330 aa0.69□□□□□ -2.3
RNU6-538P-201ENST00000622329 USP9YO00507 2555 aaPredicted RBP0.69□□□□□ -2.3
RNU6-538P-201ENST00000622329 CELSR3Q9NYQ7 3312 aa0.68□□□□□ -2.3
RNU6-538P-201ENST00000622329 ZANQ9Y493 2812 aa0.68□□□□□ -2.3
RNU6-538P-201ENST00000622329 ITPR3Q14573 2671 aa0.67□□□□□ -2.3
RNU6-538P-201ENST00000622329 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
RNU6-538P-201ENST00000622329 SVEP1Q4LDE5 3571 aa0.66□□□□□ -2.3
RNU6-538P-201ENST00000622329 FASNP49327 2511 aaKnown RBP0.65□□□□□ -2.31
RNU6-538P-201ENST00000622329 HMCN2Q8NDA2 5059 aa0.64□□□□□ -2.31
RNU6-538P-201ENST00000622329 FAT1Q14517 4588 aa0.64□□□□□ -2.31
RNU6-538P-201ENST00000622329 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
RNU6-538P-201ENST00000622329 SPRR2EP22531 72 aa0.64□□□□□ -2.31
RNU6-538P-201ENST00000622329 COL6A3P12111 3177 aa0.63□□□□□ -2.31
RNU6-538P-201ENST00000622329 TEP1Q99973 2627 aaKnown RBP0.63□□□□□ -2.31
RNU6-538P-201ENST00000622329 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
RNU6-538P-201ENST00000622329 SPRR2FQ96RM1 72 aa0.62□□□□□ -2.31
RNU6-538P-201ENST00000622329 RHPN1-AS1Q9BWJ2 59 aa0.62□□□□□ -2.31
RNU6-538P-201ENST00000622329 DNAH10Q8IVF4 4471 aa0.62□□□□□ -2.31
RNU6-538P-201ENST00000622329 MYO18BQ8IUG5 2567 aa0.61□□□□□ -2.31
RNU6-538P-201ENST00000622329 HTTP42858 3142 aa0.61□□□□□ -2.31
RNU6-538P-201ENST00000622329 TGP01266 2768 aa0.61□□□□□ -2.31
RNU6-538P-201ENST00000622329 TRIOO75962 3097 aa0.6□□□□□ -2.31
RNU6-538P-201ENST00000622329 FLNAP21333 2647 aaKnown RBP0.59□□□□□ -2.31
RNU6-538P-201ENST00000622329 RPL39P5Q59GN2 51 aa0.58□□□□□ -2.32
RNU6-538P-201ENST00000622329 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
RNU6-538P-201ENST00000622329 PLECQ15149 4684 aaKnown RBP0.57□□□□□ -2.32
RNU6-538P-201ENST00000622329 H3BUX3 64 aa0.57□□□□□ -2.32
RNU6-538P-201ENST00000622329 MAST4O15021 2626 aa0.56□□□□□ -2.32
RNU6-538P-201ENST00000622329 MXRA5Q9NR99 2828 aa0.55□□□□□ -2.32
RNU6-538P-201ENST00000622329 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
RNU6-538P-201ENST00000622329 USP9XQ93008 2570 aaPredicted RBP0.55□□□□□ -2.32
RNU6-538P-201ENST00000622329 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
RNU6-538P-201ENST00000622329 LRP2P98164 4655 aa0.55□□□□□ -2.32
RNU6-538P-201ENST00000622329 WDR87Q6ZQQ6 2873 aa0.54□□□□□ -2.32
RNU6-538P-201ENST00000622329 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
RNU6-538P-201ENST00000622329 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.33
RNU6-538P-201ENST00000622329 RELNP78509 3460 aa0.52□□□□□ -2.33
RNU6-538P-201ENST00000622329 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
RNU6-538P-201ENST00000622329 MGAQ8IWI9 3026 aa0.52□□□□□ -2.33
RNU6-538P-201ENST00000622329 ITPR1Q14643 2758 aa0.51□□□□□ -2.33
RNU6-538P-201ENST00000622329 LAMA1P25391 3075 aa0.51□□□□□ -2.33
RNU6-538P-201ENST00000622329 A0A096LNI7 61 aa0.51□□□□□ -2.33
RNU6-538P-201ENST00000622329 DEFB108AA8MXU0 73 aa0.5□□□□□ -2.33
RNU6-538P-201ENST00000622329 DEFB1P60022 68 aa0.5□□□□□ -2.33
RNU6-538P-201ENST00000622329 CFAP54Q96N23 3096 aa0.47□□□□□ -2.33
RNU6-538P-201ENST00000622329 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
RNU6-538P-201ENST00000622329 DMXL2Q8TDJ6 3036 aa0.47□□□□□ -2.33
RNU6-538P-201ENST00000622329 DEFB136Q30KP8 78 aa0.46□□□□□ -2.34
RNU6-538P-201ENST00000622329 HERC1Q15751 4861 aa0.46□□□□□ -2.34
RNU6-538P-201ENST00000622329 SMG1Q96Q15 3661 aaKnown RBP0.45□□□□□ -2.34
RNU6-538P-201ENST00000622329 DNAH17Q9UFH2 4485 aa0.45□□□□□ -2.34
RNU6-538P-201ENST00000622329 ADGRG4Q8IZF6 3080 aa0.44□□□□□ -2.34
RNU6-538P-201ENST00000622329 NBEAL1Q6ZS30 2694 aa0.44□□□□□ -2.34
RNU6-538P-201ENST00000622329 DEFB124Q8NES8 71 aa0.43□□□□□ -2.34
RNU6-538P-201ENST00000622329 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
RNU6-538P-201ENST00000622329 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
RNU6-538P-201ENST00000622329 STAB2Q8WWQ8 2551 aa0.42□□□□□ -2.34
RNU6-538P-201ENST00000622329 LAMA3Q16787 3333 aa0.41□□□□□ -2.34
RNU6-538P-201ENST00000622329 CEP250Q9BV73 2442 aa0.4□□□□□ -2.34
RNU6-538P-201ENST00000622329 DNAH5Q8TE73 4624 aa0.39□□□□□ -2.35
RNU6-538P-201ENST00000622329 MT1HP80294 61 aa0.37□□□□□ -2.35
RNU6-538P-201ENST00000622329 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
RNU6-538P-201ENST00000622329 SPTAN1Q13813 2472 aaKnown RBP0.35□□□□□ -2.35
RNU6-538P-201ENST00000622329 MUC5BQ9HC84 5762 aaPredicted RBP0.35□□□□□ -2.35
RNU6-538P-201ENST00000622329 ATMQ13315 3056 aa0.34□□□□□ -2.35
RNU6-538P-201ENST00000622329 KMT2DO14686 5537 aa0.34□□□□□ -2.35
RNU6-538P-201ENST00000622329 HTN1P15515 57 aa0.34□□□□□ -2.36
RNU6-538P-201ENST00000622329 TEX15Q9BXT5 2789 aa0.34□□□□□ -2.36
RNU6-538P-201ENST00000622329 MT1EP04732 61 aa0.33□□□□□ -2.36
RNU6-538P-201ENST00000622329 DEFB133Q30KQ1 61 aa0.33□□□□□ -2.36
RNU6-538P-201ENST00000622329 LRBAP50851 2863 aa0.32□□□□□ -2.36
RNU6-538P-201ENST00000622329 NIPBLQ6KC79 2804 aaeCLIP0.32□□□□□ -2.36
RNU6-538P-201ENST00000622329 APELAP0DMC3 54 aa0.31□□□□□ -2.36
RNU6-538P-201ENST00000622329 DMDP11532 3685 aa0.31□□□□□ -2.36
RNU6-538P-201ENST00000622329 DOPEY1Q5JWR5 2465 aa0.3□□□□□ -2.36
RNU6-538P-201ENST00000622329 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
RNU6-538P-201ENST00000622329 C5orf42Q9H799 3197 aa0.3□□□□□ -2.36
RNU6-538P-201ENST00000622329 VPS13CQ709C8 3753 aa0.29□□□□□ -2.36
RNU6-538P-201ENST00000622329 PCLOQ9Y6V0 5065 aa0.27□□□□□ -2.37
RNU6-538P-201ENST00000622329 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
RNU6-538P-201ENST00000622329 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
RNU6-538P-201ENST00000622329 RPS29P62273 56 aaKnown RBP0.25□□□□□ -2.37
RNU6-538P-201ENST00000622329 MT1LQ93083 61 aa0.25□□□□□ -2.37
RNU6-538P-201ENST00000622329 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
RNU6-538P-201ENST00000622329 DNAH12Q6ZR08 3092 aa0.25□□□□□ -2.37
RNU6-538P-201ENST00000622329 FRYLO94915 3013 aa0.25□□□□□ -2.37
RNU6-538P-201ENST00000622329 PRUNE2Q8WUY3 3088 aa0.24□□□□□ -2.37
RNU6-538P-201ENST00000622329 KMT2CQ8NEZ4 4911 aaKnown RBP0.24□□□□□ -2.37
RNU6-538P-201ENST00000622329 ITPR2Q14571 2701 aa0.22□□□□□ -2.37
RNU6-538P-201ENST00000622329 CSMD2Q7Z408 3487 aa0.21□□□□□ -2.38
RNU6-538P-201ENST00000622329 SRCAPQ6ZRS2 3230 aa0.19□□□□□ -2.38
RNU6-538P-201ENST00000622329 CFAP46Q8IYW2 2715 aa0.19□□□□□ -2.38
RNU6-538P-201ENST00000622329 DNHD1Q96M86 4753 aa0.19□□□□□ -2.38
RNU6-538P-201ENST00000622329 USH2AO75445 5202 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms