RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
ABCB1-211ENST00000622132 FAT1Q14517 4588 aa4.44□□□□□ -1.7
ABCB1-211ENST00000622132 M0QZ58 72 aa4.43□□□□□ -1.7
ABCB1-211ENST00000622132 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
ABCB1-211ENST00000622132 H0YAA0 97 aa4.42□□□□□ -1.7
ABCB1-211ENST00000622132 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
ABCB1-211ENST00000622132 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
ABCB1-211ENST00000622132 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
ABCB1-211ENST00000622132 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.71
ABCB1-211ENST00000622132 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
ABCB1-211ENST00000622132 HYDINQ4G0P3 5121 aa4.39□□□□□ -1.71
ABCB1-211ENST00000622132 RYR3Q15413 4870 aa4.38□□□□□ -1.71
ABCB1-211ENST00000622132 RYR2Q92736 4967 aa4.37□□□□□ -1.71
ABCB1-211ENST00000622132 RYR1P21817 5038 aa4.36□□□□□ -1.71
ABCB1-211ENST00000622132 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
ABCB1-211ENST00000622132 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
ABCB1-211ENST00000622132 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
ABCB1-211ENST00000622132 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
ABCB1-211ENST00000622132 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
ABCB1-211ENST00000622132 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
ABCB1-211ENST00000622132 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
ABCB1-211ENST00000622132 PKHD1P08F94 4074 aa4.25□□□□□ -1.73
ABCB1-211ENST00000622132 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
ABCB1-211ENST00000622132 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
ABCB1-211ENST00000622132 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
ABCB1-211ENST00000622132 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
ABCB1-211ENST00000622132 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
ABCB1-211ENST00000622132 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
ABCB1-211ENST00000622132 PKD1P98161 4303 aa4.18□□□□□ -1.74
ABCB1-211ENST00000622132 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
ABCB1-211ENST00000622132 HERC2O95714 4834 aa4.18□□□□□ -1.74
ABCB1-211ENST00000622132 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
ABCB1-211ENST00000622132 EPPK1P58107 5090 aaKnown RBP4.13□□□□□ -1.75
ABCB1-211ENST00000622132 HSPG2P98160 4391 aa4.12□□□□□ -1.75
ABCB1-211ENST00000622132 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
ABCB1-211ENST00000622132 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
ABCB1-211ENST00000622132 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
ABCB1-211ENST00000622132 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
ABCB1-211ENST00000622132 TNP1P09430 55 aa4.01□□□□□ -1.77
ABCB1-211ENST00000622132 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
ABCB1-211ENST00000622132 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
ABCB1-211ENST00000622132 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
ABCB1-211ENST00000622132 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
ABCB1-211ENST00000622132 LRP2P98164 4655 aa3.93□□□□□ -1.78
ABCB1-211ENST00000622132 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
ABCB1-211ENST00000622132 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
ABCB1-211ENST00000622132 MT1HP80294 61 aa3.9□□□□□ -1.78
ABCB1-211ENST00000622132 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
ABCB1-211ENST00000622132 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
ABCB1-211ENST00000622132 HERC1Q15751 4861 aa3.86□□□□□ -1.79
ABCB1-211ENST00000622132 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
ABCB1-211ENST00000622132 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
ABCB1-211ENST00000622132 INE1O15225 51 aa3.81□□□□□ -1.8
ABCB1-211ENST00000622132 TNXBP22105 4242 aa3.81□□□□□ -1.8
ABCB1-211ENST00000622132 LPAP08519 4548 aa3.8□□□□□ -1.8
ABCB1-211ENST00000622132 MT2AP02795 61 aa3.78□□□□□ -1.8
ABCB1-211ENST00000622132 MT1FP04733 61 aa3.73□□□□□ -1.81
ABCB1-211ENST00000622132 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
ABCB1-211ENST00000622132 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
ABCB1-211ENST00000622132 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
ABCB1-211ENST00000622132 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
ABCB1-211ENST00000622132 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
ABCB1-211ENST00000622132 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
ABCB1-211ENST00000622132 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
ABCB1-211ENST00000622132 MUC2Q02817 5179 aa3.6□□□□□ -1.83
ABCB1-211ENST00000622132 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
ABCB1-211ENST00000622132 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
ABCB1-211ENST00000622132 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
ABCB1-211ENST00000622132 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
ABCB1-211ENST00000622132 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
ABCB1-211ENST00000622132 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
ABCB1-211ENST00000622132 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
ABCB1-211ENST00000622132 LCE2AQ5TA79 106 aaPredicted RBP3.48□□□□□ -1.85
ABCB1-211ENST00000622132 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
ABCB1-211ENST00000622132 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
ABCB1-211ENST00000622132 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
ABCB1-211ENST00000622132 MT1BP07438 61 aa3.44□□□□□ -1.86
ABCB1-211ENST00000622132 LCE2BO14633 110 aa3.4□□□□□ -1.87
ABCB1-211ENST00000622132 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
ABCB1-211ENST00000622132 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
ABCB1-211ENST00000622132 MT1XP80297 61 aa3.36□□□□□ -1.87
ABCB1-211ENST00000622132 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
ABCB1-211ENST00000622132 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
ABCB1-211ENST00000622132 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ABCB1-211ENST00000622132 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
ABCB1-211ENST00000622132 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
ABCB1-211ENST00000622132 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
ABCB1-211ENST00000622132 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
ABCB1-211ENST00000622132 KRTAP4-8A0A0G2JLE6 195 aa3.21□□□□□ -1.9
ABCB1-211ENST00000622132 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
ABCB1-211ENST00000622132 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
ABCB1-211ENST00000622132 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
ABCB1-211ENST00000622132 SPRR2EP22531 72 aa3.13□□□□□ -1.91
ABCB1-211ENST00000622132 SPRR2BP35325 72 aa3.13□□□□□ -1.91
ABCB1-211ENST00000622132 SPRR2AP35326 72 aa3.13□□□□□ -1.91
ABCB1-211ENST00000622132 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
ABCB1-211ENST00000622132 USH2AO75445 5202 aa3.07□□□□□ -1.92
ABCB1-211ENST00000622132 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
ABCB1-211ENST00000622132 MT1GP13640 62 aa3.03□□□□□ -1.93
ABCB1-211ENST00000622132 SPRR2DP22532 72 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms