RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 NISCHQ9Y2I1 1504 aa17.32■□□□□ 0.36
ABCB1-211ENST00000622132 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
ABCB1-211ENST00000622132 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
ABCB1-211ENST00000622132 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
ABCB1-211ENST00000622132 ABCC9O60706 1549 aa14.91□□□□□ -0.02
ABCB1-211ENST00000622132 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
ABCB1-211ENST00000622132 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
ABCB1-211ENST00000622132 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
ABCB1-211ENST00000622132 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
ABCB1-211ENST00000622132 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
ABCB1-211ENST00000622132 NACADO15069 1562 aa14.09□□□□□ -0.15
ABCB1-211ENST00000622132 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
ABCB1-211ENST00000622132 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
ABCB1-211ENST00000622132 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
ABCB1-211ENST00000622132 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
ABCB1-211ENST00000622132 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.2
ABCB1-211ENST00000622132 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
ABCB1-211ENST00000622132 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
ABCB1-211ENST00000622132 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
ABCB1-211ENST00000622132 APLP2Q06481 763 aa13.62□□□□□ -0.23
ABCB1-211ENST00000622132 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
ABCB1-211ENST00000622132 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
ABCB1-211ENST00000622132 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
ABCB1-211ENST00000622132 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
ABCB1-211ENST00000622132 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
ABCB1-211ENST00000622132 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
ABCB1-211ENST00000622132 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
ABCB1-211ENST00000622132 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
ABCB1-211ENST00000622132 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
ABCB1-211ENST00000622132 MYT1Q01538 1121 aa13.36□□□□□ -0.27
ABCB1-211ENST00000622132 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
ABCB1-211ENST00000622132 FBLN2P98095 1184 aa13.28□□□□□ -0.28
ABCB1-211ENST00000622132 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
ABCB1-211ENST00000622132 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
ABCB1-211ENST00000622132 SMARCA4P51532 1647 aa13.21□□□□□ -0.29
ABCB1-211ENST00000622132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
ABCB1-211ENST00000622132 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
ABCB1-211ENST00000622132 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
ABCB1-211ENST00000622132 WIZO95785 1651 aa13.19□□□□□ -0.3
ABCB1-211ENST00000622132 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
ABCB1-211ENST00000622132 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
ABCB1-211ENST00000622132 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
ABCB1-211ENST00000622132 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
ABCB1-211ENST00000622132 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
ABCB1-211ENST00000622132 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
ABCB1-211ENST00000622132 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
ABCB1-211ENST00000622132 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
ABCB1-211ENST00000622132 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
ABCB1-211ENST00000622132 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
ABCB1-211ENST00000622132 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
ABCB1-211ENST00000622132 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
ABCB1-211ENST00000622132 ITGAEP38570 1179 aa12.96□□□□□ -0.34
ABCB1-211ENST00000622132 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
ABCB1-211ENST00000622132 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
ABCB1-211ENST00000622132 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
ABCB1-211ENST00000622132 EEA1Q15075 1411 aa12.93□□□□□ -0.34
ABCB1-211ENST00000622132 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
ABCB1-211ENST00000622132 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
ABCB1-211ENST00000622132 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
ABCB1-211ENST00000622132 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
ABCB1-211ENST00000622132 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
ABCB1-211ENST00000622132 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
ABCB1-211ENST00000622132 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
ABCB1-211ENST00000622132 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
ABCB1-211ENST00000622132 CUX2O14529 1486 aa12.87□□□□□ -0.35
ABCB1-211ENST00000622132 SOGA1O94964 1423 aa12.85□□□□□ -0.35
ABCB1-211ENST00000622132 HMGXB3Q12766 1538 aa12.84□□□□□ -0.35
ABCB1-211ENST00000622132 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.36
ABCB1-211ENST00000622132 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
ABCB1-211ENST00000622132 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
ABCB1-211ENST00000622132 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
ABCB1-211ENST00000622132 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
ABCB1-211ENST00000622132 CLIP1P30622 1438 aa12.76□□□□□ -0.37
ABCB1-211ENST00000622132 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
ABCB1-211ENST00000622132 CFTRP13569 1480 aa12.76□□□□□ -0.37
ABCB1-211ENST00000622132 NESP48681 1621 aa12.76□□□□□ -0.37
ABCB1-211ENST00000622132 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
ABCB1-211ENST00000622132 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
ABCB1-211ENST00000622132 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
ABCB1-211ENST00000622132 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
ABCB1-211ENST00000622132 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
ABCB1-211ENST00000622132 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
ABCB1-211ENST00000622132 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
ABCB1-211ENST00000622132 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
ABCB1-211ENST00000622132 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
ABCB1-211ENST00000622132 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
ABCB1-211ENST00000622132 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
ABCB1-211ENST00000622132 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
ABCB1-211ENST00000622132 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
ABCB1-211ENST00000622132 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
ABCB1-211ENST00000622132 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
ABCB1-211ENST00000622132 GAPVD1Q14C86 1478 aa12.56□□□□□ -0.4
ABCB1-211ENST00000622132 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4
ABCB1-211ENST00000622132 IGF1RP08069 1367 aa12.54□□□□□ -0.4
ABCB1-211ENST00000622132 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
ABCB1-211ENST00000622132 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
ABCB1-211ENST00000622132 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
ABCB1-211ENST00000622132 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
ABCB1-211ENST00000622132 CUX1P39880 1505 aa12.5□□□□□ -0.41
ABCB1-211ENST00000622132 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms