RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
CLTC-215ENST00000621829 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
CLTC-215ENST00000621829 DNAH2Q9P225 4427 aa4.65□□□□□ -1.66
CLTC-215ENST00000621829 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.66
CLTC-215ENST00000621829 ZNF469Q96JG9 3925 aaPredicted RBP4.59□□□□□ -1.68
CLTC-215ENST00000621829 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
CLTC-215ENST00000621829 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
CLTC-215ENST00000621829 ANK2Q01484 3957 aa4.51□□□□□ -1.69
CLTC-215ENST00000621829 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
CLTC-215ENST00000621829 DNAH8Q96JB1 4490 aa4.47□□□□□ -1.69
CLTC-215ENST00000621829 DNAH3Q8TD57 4116 aa4.47□□□□□ -1.69
CLTC-215ENST00000621829 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
CLTC-215ENST00000621829 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.7
CLTC-215ENST00000621829 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CLTC-215ENST00000621829 LYSTQ99698 3801 aa4.43□□□□□ -1.7
CLTC-215ENST00000621829 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
CLTC-215ENST00000621829 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
CLTC-215ENST00000621829 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
CLTC-215ENST00000621829 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
CLTC-215ENST00000621829 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
CLTC-215ENST00000621829 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
CLTC-215ENST00000621829 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
CLTC-215ENST00000621829 DNAH7Q8WXX0 4024 aa4.28□□□□□ -1.72
CLTC-215ENST00000621829 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
CLTC-215ENST00000621829 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
CLTC-215ENST00000621829 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
CLTC-215ENST00000621829 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
CLTC-215ENST00000621829 DNAH9Q9NYC9 4486 aa4.19□□□□□ -1.74
CLTC-215ENST00000621829 MT1HP80294 61 aa4.19□□□□□ -1.74
CLTC-215ENST00000621829 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
CLTC-215ENST00000621829 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
CLTC-215ENST00000621829 MT2AP02795 61 aa4.16□□□□□ -1.74
CLTC-215ENST00000621829 MT1FP04733 61 aa4.1□□□□□ -1.75
CLTC-215ENST00000621829 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.75
CLTC-215ENST00000621829 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
CLTC-215ENST00000621829 MT3P25713 68 aa4.07□□□□□ -1.76
CLTC-215ENST00000621829 MT1GP13640 62 aa4.06□□□□□ -1.76
CLTC-215ENST00000621829 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
CLTC-215ENST00000621829 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
CLTC-215ENST00000621829 PLECQ15149 4684 aaKnown RBP4.03□□□□□ -1.76
CLTC-215ENST00000621829 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
CLTC-215ENST00000621829 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
CLTC-215ENST00000621829 DNAH5Q8TE73 4624 aa3.99□□□□□ -1.77
CLTC-215ENST00000621829 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
CLTC-215ENST00000621829 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
CLTC-215ENST00000621829 FAT1Q14517 4588 aa3.96□□□□□ -1.78
CLTC-215ENST00000621829 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
CLTC-215ENST00000621829 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
CLTC-215ENST00000621829 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
CLTC-215ENST00000621829 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CLTC-215ENST00000621829 MT1XP80297 61 aa3.89□□□□□ -1.79
CLTC-215ENST00000621829 PRM1P04553 51 aa3.86□□□□□ -1.79
CLTC-215ENST00000621829 SPRR2EP22531 72 aa3.86□□□□□ -1.79
CLTC-215ENST00000621829 SPRR2BP35325 72 aa3.86□□□□□ -1.79
CLTC-215ENST00000621829 SPRR2AP35326 72 aa3.86□□□□□ -1.79
CLTC-215ENST00000621829 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
CLTC-215ENST00000621829 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
CLTC-215ENST00000621829 SACSQ9NZJ4 4579 aa3.84□□□□□ -1.79
CLTC-215ENST00000621829 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
CLTC-215ENST00000621829 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
CLTC-215ENST00000621829 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
CLTC-215ENST00000621829 PKD1P98161 4303 aa3.78□□□□□ -1.8
CLTC-215ENST00000621829 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
CLTC-215ENST00000621829 LCE2BO14633 110 aa3.74□□□□□ -1.81
CLTC-215ENST00000621829 SPRR2DP22532 72 aa3.71□□□□□ -1.81
CLTC-215ENST00000621829 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
CLTC-215ENST00000621829 MT1BP07438 61 aa3.69□□□□□ -1.82
CLTC-215ENST00000621829 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
CLTC-215ENST00000621829 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
CLTC-215ENST00000621829 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
CLTC-215ENST00000621829 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
CLTC-215ENST00000621829 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
CLTC-215ENST00000621829 MT1LQ93083 61 aa3.58□□□□□ -1.84
CLTC-215ENST00000621829 LPAP08519 4548 aa3.57□□□□□ -1.84
CLTC-215ENST00000621829 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
CLTC-215ENST00000621829 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
CLTC-215ENST00000621829 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.85
CLTC-215ENST00000621829 TNXBP22105 4242 aa3.51□□□□□ -1.85
CLTC-215ENST00000621829 MT1EP04732 61 aa3.48□□□□□ -1.85
CLTC-215ENST00000621829 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CLTC-215ENST00000621829 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
CLTC-215ENST00000621829 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
CLTC-215ENST00000621829 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
CLTC-215ENST00000621829 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
CLTC-215ENST00000621829 HSPG2P98160 4391 aa3.45□□□□□ -1.86
CLTC-215ENST00000621829 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CLTC-215ENST00000621829 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
CLTC-215ENST00000621829 MT4P47944 62 aa3.41□□□□□ -1.86
CLTC-215ENST00000621829 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.87
CLTC-215ENST00000621829 MT1MQ8N339 61 aa3.38□□□□□ -1.87
CLTC-215ENST00000621829 LRP2P98164 4655 aa3.35□□□□□ -1.87
CLTC-215ENST00000621829 RYR1P21817 5038 aa3.33□□□□□ -1.88
CLTC-215ENST00000621829 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
CLTC-215ENST00000621829 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
CLTC-215ENST00000621829 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
CLTC-215ENST00000621829 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CLTC-215ENST00000621829 DNHD1Q96M86 4753 aa3.23□□□□□ -1.89
CLTC-215ENST00000621829 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
CLTC-215ENST00000621829 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
CLTC-215ENST00000621829 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms