RNA–Protein interactions for RNA: ENST00000621139.4

WHAMMP3-203, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene WHAMMP3, Length 4,494 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-203ENST00000621139 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
WHAMMP3-203ENST00000621139 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
WHAMMP3-203ENST00000621139 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
WHAMMP3-203ENST00000621139 LYSTQ99698 3801 aa8.48□□□□□ -1.05
WHAMMP3-203ENST00000621139 DNAH17Q9UFH2 4485 aa8.47□□□□□ -1.05
WHAMMP3-203ENST00000621139 DNAH8Q96JB1 4490 aa8.46□□□□□ -1.05
WHAMMP3-203ENST00000621139 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
WHAMMP3-203ENST00000621139 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
WHAMMP3-203ENST00000621139 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
WHAMMP3-203ENST00000621139 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
WHAMMP3-203ENST00000621139 PP632Q6XCG6 107 aa8.37□□□□□ -1.07
WHAMMP3-203ENST00000621139 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
WHAMMP3-203ENST00000621139 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
WHAMMP3-203ENST00000621139 DNAH3Q8TD57 4116 aa8.28□□□□□ -1.08
WHAMMP3-203ENST00000621139 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
WHAMMP3-203ENST00000621139 DNAH7Q8WXX0 4024 aa8.25□□□□□ -1.09
WHAMMP3-203ENST00000621139 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
WHAMMP3-203ENST00000621139 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
WHAMMP3-203ENST00000621139 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
WHAMMP3-203ENST00000621139 RYR1P21817 5038 aa8.18□□□□□ -1.1
WHAMMP3-203ENST00000621139 KIAA1109Q2LD37 5005 aa8.18□□□□□ -1.1
WHAMMP3-203ENST00000621139 VPS13BQ7Z7G8 4022 aa8.17□□□□□ -1.1
WHAMMP3-203ENST00000621139 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
WHAMMP3-203ENST00000621139 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
WHAMMP3-203ENST00000621139 SACSQ9NZJ4 4579 aa8.06□□□□□ -1.12
WHAMMP3-203ENST00000621139 HECTD4Q9Y4D8 3996 aa8.04□□□□□ -1.12
WHAMMP3-203ENST00000621139 RYR3Q15413 4870 aa8.01□□□□□ -1.13
WHAMMP3-203ENST00000621139 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
WHAMMP3-203ENST00000621139 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
WHAMMP3-203ENST00000621139 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
WHAMMP3-203ENST00000621139 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
WHAMMP3-203ENST00000621139 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
WHAMMP3-203ENST00000621139 APOBP04114 4563 aaKnown RBP7.92□□□□□ -1.14
WHAMMP3-203ENST00000621139 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
WHAMMP3-203ENST00000621139 PKHD1P08F94 4074 aa7.86□□□□□ -1.15
WHAMMP3-203ENST00000621139 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
WHAMMP3-203ENST00000621139 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
WHAMMP3-203ENST00000621139 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
WHAMMP3-203ENST00000621139 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
WHAMMP3-203ENST00000621139 RYR2Q92736 4967 aa7.74□□□□□ -1.17
WHAMMP3-203ENST00000621139 LRP2P98164 4655 aa7.62□□□□□ -1.19
WHAMMP3-203ENST00000621139 HERC2O95714 4834 aa7.59□□□□□ -1.19
WHAMMP3-203ENST00000621139 PKD1P98161 4303 aa7.52□□□□□ -1.21
WHAMMP3-203ENST00000621139 HSPG2P98160 4391 aa7.41□□□□□ -1.22
WHAMMP3-203ENST00000621139 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
WHAMMP3-203ENST00000621139 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
WHAMMP3-203ENST00000621139 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
WHAMMP3-203ENST00000621139 LPAP08519 4548 aa7.29□□□□□ -1.24
WHAMMP3-203ENST00000621139 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
WHAMMP3-203ENST00000621139 MT1HP80294 61 aa7.23□□□□□ -1.25
WHAMMP3-203ENST00000621139 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
WHAMMP3-203ENST00000621139 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
WHAMMP3-203ENST00000621139 MT2AP02795 61 aa7.17□□□□□ -1.26
WHAMMP3-203ENST00000621139 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
WHAMMP3-203ENST00000621139 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
WHAMMP3-203ENST00000621139 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
WHAMMP3-203ENST00000621139 MT1FP04733 61 aa7.13□□□□□ -1.27
WHAMMP3-203ENST00000621139 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
WHAMMP3-203ENST00000621139 TNXBP22105 4242 aa7.06□□□□□ -1.28
WHAMMP3-203ENST00000621139 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
WHAMMP3-203ENST00000621139 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
WHAMMP3-203ENST00000621139 HERC1Q15751 4861 aa6.97□□□□□ -1.29
WHAMMP3-203ENST00000621139 INE1O15225 51 aa6.88□□□□□ -1.31
WHAMMP3-203ENST00000621139 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
WHAMMP3-203ENST00000621139 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
WHAMMP3-203ENST00000621139 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
WHAMMP3-203ENST00000621139 MUC2Q02817 5179 aa6.8□□□□□ -1.32
WHAMMP3-203ENST00000621139 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
WHAMMP3-203ENST00000621139 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
WHAMMP3-203ENST00000621139 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
WHAMMP3-203ENST00000621139 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
WHAMMP3-203ENST00000621139 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
WHAMMP3-203ENST00000621139 MT1BP07438 61 aa6.65□□□□□ -1.34
WHAMMP3-203ENST00000621139 MT1XP80297 61 aa6.64□□□□□ -1.35
WHAMMP3-203ENST00000621139 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
WHAMMP3-203ENST00000621139 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
WHAMMP3-203ENST00000621139 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
WHAMMP3-203ENST00000621139 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
WHAMMP3-203ENST00000621139 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
WHAMMP3-203ENST00000621139 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
WHAMMP3-203ENST00000621139 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
WHAMMP3-203ENST00000621139 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
WHAMMP3-203ENST00000621139 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.39
WHAMMP3-203ENST00000621139 LCE2BO14633 110 aa6.29□□□□□ -1.4
WHAMMP3-203ENST00000621139 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
WHAMMP3-203ENST00000621139 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
WHAMMP3-203ENST00000621139 MT1GP13640 62 aa5.99□□□□□ -1.45
WHAMMP3-203ENST00000621139 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
WHAMMP3-203ENST00000621139 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
WHAMMP3-203ENST00000621139 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
WHAMMP3-203ENST00000621139 USH2AO75445 5202 aa5.93□□□□□ -1.46
WHAMMP3-203ENST00000621139 MT1LQ93083 61 aa5.88□□□□□ -1.47
WHAMMP3-203ENST00000621139 MT1EP04732 61 aa5.85□□□□□ -1.47
WHAMMP3-203ENST00000621139 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
WHAMMP3-203ENST00000621139 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
WHAMMP3-203ENST00000621139 SPRR2EP22531 72 aa5.79□□□□□ -1.48
WHAMMP3-203ENST00000621139 SPRR2BP35325 72 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms