RNA–Protein interactions for RNA: ENST00000621139.4

WHAMMP3-203, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene WHAMMP3, Length 4,494 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-203ENST00000621139 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
WHAMMP3-203ENST00000621139 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
WHAMMP3-203ENST00000621139 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
WHAMMP3-203ENST00000621139 LYSTQ99698 3801 aa8.48□□□□□ -1.05
WHAMMP3-203ENST00000621139 DNAH17Q9UFH2 4485 aa8.47□□□□□ -1.05
WHAMMP3-203ENST00000621139 DNAH8Q96JB1 4490 aa8.46□□□□□ -1.05
WHAMMP3-203ENST00000621139 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
WHAMMP3-203ENST00000621139 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
WHAMMP3-203ENST00000621139 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
WHAMMP3-203ENST00000621139 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
WHAMMP3-203ENST00000621139 PP632Q6XCG6 107 aa8.37□□□□□ -1.07
WHAMMP3-203ENST00000621139 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
WHAMMP3-203ENST00000621139 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
WHAMMP3-203ENST00000621139 DNAH3Q8TD57 4116 aa8.28□□□□□ -1.08
WHAMMP3-203ENST00000621139 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
WHAMMP3-203ENST00000621139 DNAH7Q8WXX0 4024 aa8.25□□□□□ -1.09
WHAMMP3-203ENST00000621139 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
WHAMMP3-203ENST00000621139 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
WHAMMP3-203ENST00000621139 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
WHAMMP3-203ENST00000621139 RYR1P21817 5038 aa8.18□□□□□ -1.1
WHAMMP3-203ENST00000621139 KIAA1109Q2LD37 5005 aa8.18□□□□□ -1.1
WHAMMP3-203ENST00000621139 VPS13BQ7Z7G8 4022 aa8.17□□□□□ -1.1
WHAMMP3-203ENST00000621139 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
WHAMMP3-203ENST00000621139 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
WHAMMP3-203ENST00000621139 SACSQ9NZJ4 4579 aa8.06□□□□□ -1.12
WHAMMP3-203ENST00000621139 HECTD4Q9Y4D8 3996 aa8.04□□□□□ -1.12
WHAMMP3-203ENST00000621139 RYR3Q15413 4870 aa8.01□□□□□ -1.13
WHAMMP3-203ENST00000621139 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
WHAMMP3-203ENST00000621139 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
WHAMMP3-203ENST00000621139 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
WHAMMP3-203ENST00000621139 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
WHAMMP3-203ENST00000621139 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
WHAMMP3-203ENST00000621139 APOBP04114 4563 aaKnown RBP7.92□□□□□ -1.14
WHAMMP3-203ENST00000621139 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
WHAMMP3-203ENST00000621139 PKHD1P08F94 4074 aa7.86□□□□□ -1.15
WHAMMP3-203ENST00000621139 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
WHAMMP3-203ENST00000621139 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
WHAMMP3-203ENST00000621139 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
WHAMMP3-203ENST00000621139 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
WHAMMP3-203ENST00000621139 RYR2Q92736 4967 aa7.74□□□□□ -1.17
WHAMMP3-203ENST00000621139 LRP2P98164 4655 aa7.62□□□□□ -1.19
WHAMMP3-203ENST00000621139 HERC2O95714 4834 aa7.59□□□□□ -1.19
WHAMMP3-203ENST00000621139 PKD1P98161 4303 aa7.52□□□□□ -1.21
WHAMMP3-203ENST00000621139 HSPG2P98160 4391 aa7.41□□□□□ -1.22
WHAMMP3-203ENST00000621139 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
WHAMMP3-203ENST00000621139 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
WHAMMP3-203ENST00000621139 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
WHAMMP3-203ENST00000621139 LPAP08519 4548 aa7.29□□□□□ -1.24
WHAMMP3-203ENST00000621139 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
WHAMMP3-203ENST00000621139 MT1HP80294 61 aa7.23□□□□□ -1.25
WHAMMP3-203ENST00000621139 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
WHAMMP3-203ENST00000621139 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
WHAMMP3-203ENST00000621139 MT2AP02795 61 aa7.17□□□□□ -1.26
WHAMMP3-203ENST00000621139 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
WHAMMP3-203ENST00000621139 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
WHAMMP3-203ENST00000621139 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
WHAMMP3-203ENST00000621139 MT1FP04733 61 aa7.13□□□□□ -1.27
WHAMMP3-203ENST00000621139 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
WHAMMP3-203ENST00000621139 TNXBP22105 4242 aa7.06□□□□□ -1.28
WHAMMP3-203ENST00000621139 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
WHAMMP3-203ENST00000621139 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
WHAMMP3-203ENST00000621139 HERC1Q15751 4861 aa6.97□□□□□ -1.29
WHAMMP3-203ENST00000621139 INE1O15225 51 aa6.88□□□□□ -1.31
WHAMMP3-203ENST00000621139 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
WHAMMP3-203ENST00000621139 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
WHAMMP3-203ENST00000621139 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
WHAMMP3-203ENST00000621139 MUC2Q02817 5179 aa6.8□□□□□ -1.32
WHAMMP3-203ENST00000621139 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
WHAMMP3-203ENST00000621139 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
WHAMMP3-203ENST00000621139 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
WHAMMP3-203ENST00000621139 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
WHAMMP3-203ENST00000621139 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
WHAMMP3-203ENST00000621139 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
WHAMMP3-203ENST00000621139 MT1BP07438 61 aa6.65□□□□□ -1.34
WHAMMP3-203ENST00000621139 MT1XP80297 61 aa6.64□□□□□ -1.35
WHAMMP3-203ENST00000621139 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
WHAMMP3-203ENST00000621139 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
WHAMMP3-203ENST00000621139 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
WHAMMP3-203ENST00000621139 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
WHAMMP3-203ENST00000621139 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
WHAMMP3-203ENST00000621139 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
WHAMMP3-203ENST00000621139 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
WHAMMP3-203ENST00000621139 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
WHAMMP3-203ENST00000621139 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.39
WHAMMP3-203ENST00000621139 LCE2BO14633 110 aa6.29□□□□□ -1.4
WHAMMP3-203ENST00000621139 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
WHAMMP3-203ENST00000621139 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
WHAMMP3-203ENST00000621139 MT1GP13640 62 aa5.99□□□□□ -1.45
WHAMMP3-203ENST00000621139 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
WHAMMP3-203ENST00000621139 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
WHAMMP3-203ENST00000621139 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
WHAMMP3-203ENST00000621139 USH2AO75445 5202 aa5.93□□□□□ -1.46
WHAMMP3-203ENST00000621139 MT1LQ93083 61 aa5.88□□□□□ -1.47
WHAMMP3-203ENST00000621139 MT1EP04732 61 aa5.85□□□□□ -1.47
WHAMMP3-203ENST00000621139 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
WHAMMP3-203ENST00000621139 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
WHAMMP3-203ENST00000621139 SPRR2EP22531 72 aa5.79□□□□□ -1.48
WHAMMP3-203ENST00000621139 SPRR2BP35325 72 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms