RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
ATP13A3-211ENST00000619199 STARD9Q9P2P6 4700 aa2.59□□□□□ -1.99
ATP13A3-211ENST00000619199 DNAH10Q8IVF4 4471 aa2.59□□□□□ -2
ATP13A3-211ENST00000619199 TPRXLQ17RH7 258 aa2.58□□□□□ -2
ATP13A3-211ENST00000619199 DNAH6Q9C0G6 4158 aa2.57□□□□□ -2
ATP13A3-211ENST00000619199 KRTAP10-10P60014 251 aa2.56□□□□□ -2
ATP13A3-211ENST00000619199 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
ATP13A3-211ENST00000619199 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
ATP13A3-211ENST00000619199 XP32Q5T750 250 aa2.54□□□□□ -2
ATP13A3-211ENST00000619199 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
ATP13A3-211ENST00000619199 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
ATP13A3-211ENST00000619199 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
ATP13A3-211ENST00000619199 DNAH11Q96DT5 4516 aa2.5□□□□□ -2.01
ATP13A3-211ENST00000619199 RYR2Q92736 4967 aa2.5□□□□□ -2.01
ATP13A3-211ENST00000619199 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
ATP13A3-211ENST00000619199 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
ATP13A3-211ENST00000619199 H0YAA0 97 aa2.48□□□□□ -2.01
ATP13A3-211ENST00000619199 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
ATP13A3-211ENST00000619199 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
ATP13A3-211ENST00000619199 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
ATP13A3-211ENST00000619199 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
ATP13A3-211ENST00000619199 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
ATP13A3-211ENST00000619199 HSPG2P98160 4391 aa2.45□□□□□ -2.02
ATP13A3-211ENST00000619199 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
ATP13A3-211ENST00000619199 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
ATP13A3-211ENST00000619199 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
ATP13A3-211ENST00000619199 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
ATP13A3-211ENST00000619199 INE1O15225 51 aa2.43□□□□□ -2.02
ATP13A3-211ENST00000619199 RYR1P21817 5038 aa2.43□□□□□ -2.02
ATP13A3-211ENST00000619199 DNAH8Q96JB1 4490 aa2.41□□□□□ -2.02
ATP13A3-211ENST00000619199 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
ATP13A3-211ENST00000619199 DNAH17Q9UFH2 4485 aa2.4□□□□□ -2.03
ATP13A3-211ENST00000619199 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
ATP13A3-211ENST00000619199 KRTAP15-1Q3LI76 137 aa2.39□□□□□ -2.03
ATP13A3-211ENST00000619199 LCE2AQ5TA79 106 aaPredicted RBP2.37□□□□□ -2.03
ATP13A3-211ENST00000619199 KRTAP3-1Q9BYR8 98 aa2.36□□□□□ -2.03
ATP13A3-211ENST00000619199 PKHD1L1Q86WI1 4243 aa2.33□□□□□ -2.04
ATP13A3-211ENST00000619199 MUC2Q02817 5179 aa2.33□□□□□ -2.04
ATP13A3-211ENST00000619199 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
ATP13A3-211ENST00000619199 HERC1Q15751 4861 aa2.3□□□□□ -2.04
ATP13A3-211ENST00000619199 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
ATP13A3-211ENST00000619199 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
ATP13A3-211ENST00000619199 KRTAP3-3Q9BYR6 98 aa2.29□□□□□ -2.04
ATP13A3-211ENST00000619199 KRTAP3-2Q9BYR7 98 aa2.29□□□□□ -2.04
ATP13A3-211ENST00000619199 LPAP08519 4548 aa2.28□□□□□ -2.04
ATP13A3-211ENST00000619199 APOBP04114 4563 aaKnown RBP2.26□□□□□ -2.05
ATP13A3-211ENST00000619199 KIAA1109Q2LD37 5005 aa2.23□□□□□ -2.05
ATP13A3-211ENST00000619199 RNF213Q63HN8 5207 aa2.22□□□□□ -2.05
ATP13A3-211ENST00000619199 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
ATP13A3-211ENST00000619199 LCE2BO14633 110 aa2.22□□□□□ -2.05
ATP13A3-211ENST00000619199 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
ATP13A3-211ENST00000619199 TNXBP22105 4242 aa2.19□□□□□ -2.06
ATP13A3-211ENST00000619199 FAT1Q14517 4588 aa2.16□□□□□ -2.06
ATP13A3-211ENST00000619199 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
ATP13A3-211ENST00000619199 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
ATP13A3-211ENST00000619199 DYNC1H1Q14204 4646 aaKnown RBP2.15□□□□□ -2.07
ATP13A3-211ENST00000619199 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
ATP13A3-211ENST00000619199 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
ATP13A3-211ENST00000619199 BIRC6Q9NR09 4857 aa2.14□□□□□ -2.07
ATP13A3-211ENST00000619199 KRTAP10-4P60372 401 aaPredicted RBP2.14□□□□□ -2.07
ATP13A3-211ENST00000619199 HERC2O95714 4834 aa2.13□□□□□ -2.07
ATP13A3-211ENST00000619199 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.13□□□□□ -2.07
ATP13A3-211ENST00000619199 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
ATP13A3-211ENST00000619199 KRTAP4-8Q9BYQ9 185 aa2.1□□□□□ -2.07
ATP13A3-211ENST00000619199 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.08
ATP13A3-211ENST00000619199 KRTAP19-4Q3LI73 84 aa2.08□□□□□ -2.08
ATP13A3-211ENST00000619199 KRTAP10-5P60370 271 aa2.07□□□□□ -2.08
ATP13A3-211ENST00000619199 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
ATP13A3-211ENST00000619199 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
ATP13A3-211ENST00000619199 LRP2P98164 4655 aa2.04□□□□□ -2.08
ATP13A3-211ENST00000619199 KRTAP9-2Q9BYQ4 174 aa2.03□□□□□ -2.08
ATP13A3-211ENST00000619199 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
ATP13A3-211ENST00000619199 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
ATP13A3-211ENST00000619199 MT1HL1P0DM35 61 aa2□□□□□ -2.09
ATP13A3-211ENST00000619199 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
ATP13A3-211ENST00000619199 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
ATP13A3-211ENST00000619199 KRTAP9-4Q9BYQ2 154 aa1.99□□□□□ -2.09
ATP13A3-211ENST00000619199 MUC17Q685J3 4493 aa1.99□□□□□ -2.09
ATP13A3-211ENST00000619199 LCE2CQ5TA81 110 aa1.98□□□□□ -2.09
ATP13A3-211ENST00000619199 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
ATP13A3-211ENST00000619199 LORP23490 312 aaPredicted RBP1.96□□□□□ -2.1
ATP13A3-211ENST00000619199 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
ATP13A3-211ENST00000619199 USH2AO75445 5202 aa1.91□□□□□ -2.1
ATP13A3-211ENST00000619199 KRTAP4-8A0A0G2JLE6 195 aa1.86□□□□□ -2.11
ATP13A3-211ENST00000619199 KRTAP19-1Q8IUB9 90 aa1.86□□□□□ -2.11
ATP13A3-211ENST00000619199 KRTAP4-5Q9BYR2 181 aa1.86□□□□□ -2.11
ATP13A3-211ENST00000619199 SPRR2FQ96RM1 72 aa1.85□□□□□ -2.11
ATP13A3-211ENST00000619199 KRTAP19-2Q3LHN2 52 aa1.84□□□□□ -2.12
ATP13A3-211ENST00000619199 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
ATP13A3-211ENST00000619199 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
ATP13A3-211ENST00000619199 KRTAP4-7Q9BYR0 210 aa1.83□□□□□ -2.12
ATP13A3-211ENST00000619199 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
ATP13A3-211ENST00000619199 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
ATP13A3-211ENST00000619199 MT1HP80294 61 aa1.78□□□□□ -2.12
ATP13A3-211ENST00000619199 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
ATP13A3-211ENST00000619199 MT2AP02795 61 aa1.78□□□□□ -2.13
ATP13A3-211ENST00000619199 SPRR2EP22531 72 aa1.77□□□□□ -2.13
ATP13A3-211ENST00000619199 SPRR2BP35325 72 aa1.77□□□□□ -2.13
ATP13A3-211ENST00000619199 SPRR2AP35326 72 aa1.77□□□□□ -2.13
ATP13A3-211ENST00000619199 KRTAP4-9Q9BYQ8 210 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms