RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 MT3P25713 68 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 KRTAP11-1Q8IUC1 163 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 PKD1P98161 4303 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 KRTAP25-1Q3LHN0 102 aa1.77□□□□□ -2.13
LPP-221ENST00000618621 CSMD1Q96PZ7 3565 aa1.77□□□□□ -2.13
LPP-221ENST00000618621 PANO1I0J062 215 aa1.77□□□□□ -2.13
LPP-221ENST00000618621 KRTAP10-2P60368 255 aa1.76□□□□□ -2.13
LPP-221ENST00000618621 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
LPP-221ENST00000618621 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
LPP-221ENST00000618621 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
LPP-221ENST00000618621 RELNP78509 3460 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 TNXBP22105 4242 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 A8MUU9 505 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 MUC3AQ02505 3323 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 HSPG2P98160 4391 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 PRO2289Q9P1D8 64 aa1.75□□□□□ -2.13
LPP-221ENST00000618621 KRTAP13-1Q8IUC0 172 aa1.74□□□□□ -2.13
LPP-221ENST00000618621 HYDINQ4G0P3 5121 aa1.73□□□□□ -2.13
LPP-221ENST00000618621 RYR2Q92736 4967 aa1.73□□□□□ -2.13
LPP-221ENST00000618621 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
LPP-221ENST00000618621 STARD9Q9P2P6 4700 aa1.72□□□□□ -2.13
LPP-221ENST00000618621 TNP1P09430 55 aa1.72□□□□□ -2.13
LPP-221ENST00000618621 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
LPP-221ENST00000618621 HERC2O95714 4834 aa1.72□□□□□ -2.13
LPP-221ENST00000618621 HERC1Q15751 4861 aa1.71□□□□□ -2.14
LPP-221ENST00000618621 KRTAP3-3Q9BYR6 98 aa1.69□□□□□ -2.14
LPP-221ENST00000618621 KRTAP3-2Q9BYR7 98 aa1.69□□□□□ -2.14
LPP-221ENST00000618621 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
LPP-221ENST00000618621 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
LPP-221ENST00000618621 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
LPP-221ENST00000618621 EPPK1P58107 5090 aaKnown RBP1.66□□□□□ -2.14
LPP-221ENST00000618621 KRTAP10-8P60410 259 aa1.65□□□□□ -2.15
LPP-221ENST00000618621 KRTAP13-3Q3SY46 172 aa1.65□□□□□ -2.15
LPP-221ENST00000618621 INE1O15225 51 aa1.64□□□□□ -2.15
LPP-221ENST00000618621 PCLOQ9Y6V0 5065 aa1.63□□□□□ -2.15
LPP-221ENST00000618621 LRP2P98164 4655 aa1.63□□□□□ -2.15
LPP-221ENST00000618621 H0YAA0 97 aa1.63□□□□□ -2.15
LPP-221ENST00000618621 KRTAP15-1Q3LI76 137 aa1.62□□□□□ -2.15
LPP-221ENST00000618621 KRTAP1-4P0C5Y4 121 aa1.62□□□□□ -2.15
LPP-221ENST00000618621 CSMD2Q7Z408 3487 aa1.61□□□□□ -2.15
LPP-221ENST00000618621 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
LPP-221ENST00000618621 LCE2CQ5TA81 110 aa1.6□□□□□ -2.15
LPP-221ENST00000618621 LCE2DQ5TA82 110 aaPredicted RBP1.6□□□□□ -2.15
LPP-221ENST00000618621 KRTAP10-6P60371 365 aaPredicted RBP1.58□□□□□ -2.16
LPP-221ENST00000618621 XP32Q5T750 250 aa1.57□□□□□ -2.16
LPP-221ENST00000618621 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
LPP-221ENST00000618621 KRTAP3-1Q9BYR8 98 aa1.56□□□□□ -2.16
LPP-221ENST00000618621 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
LPP-221ENST00000618621 LCE2AQ5TA79 106 aaPredicted RBP1.56□□□□□ -2.16
LPP-221ENST00000618621 A0A1B0GVY2 172 aa1.55□□□□□ -2.16
LPP-221ENST00000618621 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
LPP-221ENST00000618621 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
LPP-221ENST00000618621 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
LPP-221ENST00000618621 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
LPP-221ENST00000618621 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
LPP-221ENST00000618621 KRTAP12-2P59991 146 aa1.51□□□□□ -2.17
LPP-221ENST00000618621 MUC17Q685J3 4493 aa1.5□□□□□ -2.17
LPP-221ENST00000618621 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
LPP-221ENST00000618621 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
LPP-221ENST00000618621 LCE2BO14633 110 aa1.5□□□□□ -2.17
LPP-221ENST00000618621 KRTAP10-10P60014 251 aa1.49□□□□□ -2.17
LPP-221ENST00000618621 FSIP2Q5CZC0 6907 aa1.49□□□□□ -2.17
LPP-221ENST00000618621 KRTAP4-5Q9BYR2 181 aa1.46□□□□□ -2.18
LPP-221ENST00000618621 NEBP20929 6669 aa1.46□□□□□ -2.18
LPP-221ENST00000618621 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
LPP-221ENST00000618621 FAT4Q6V0I7 4981 aa1.45□□□□□ -2.18
LPP-221ENST00000618621 LPAP08519 4548 aa1.45□□□□□ -2.18
LPP-221ENST00000618621 MT1HL1P0DM35 61 aa1.42□□□□□ -2.18
LPP-221ENST00000618621 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.18
LPP-221ENST00000618621 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
LPP-221ENST00000618621 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
LPP-221ENST00000618621 LORP23490 312 aaPredicted RBP1.37□□□□□ -2.19
LPP-221ENST00000618621 KRTAP17-1Q9BYP8 105 aa1.36□□□□□ -2.19
LPP-221ENST00000618621 USH2AO75445 5202 aa1.36□□□□□ -2.19
LPP-221ENST00000618621 KMT2DO14686 5537 aa1.36□□□□□ -2.19
LPP-221ENST00000618621 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
LPP-221ENST00000618621 KRTAP12-3P60328 96 aa1.33□□□□□ -2.2
LPP-221ENST00000618621 KRTAP10-5P60370 271 aa1.33□□□□□ -2.2
LPP-221ENST00000618621 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
LPP-221ENST00000618621 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
LPP-221ENST00000618621 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
LPP-221ENST00000618621 MUC2Q02817 5179 aa1.3□□□□□ -2.2
LPP-221ENST00000618621 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
LPP-221ENST00000618621 LCE3BQ5TA77 95 aa1.28□□□□□ -2.21
LPP-221ENST00000618621 LCE3AQ5TA76 89 aa1.26□□□□□ -2.21
LPP-221ENST00000618621 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
LPP-221ENST00000618621 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
LPP-221ENST00000618621 SPRR5A0A1B0GTR4 108 aa1.25□□□□□ -2.21
LPP-221ENST00000618621 MT1HP80294 61 aa1.24□□□□□ -2.21
LPP-221ENST00000618621 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
LPP-221ENST00000618621 MT2AP02795 61 aa1.21□□□□□ -2.22
LPP-221ENST00000618621 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
LPP-221ENST00000618621 KRTAP8-1Q8IUC2 63 aa1.2□□□□□ -2.22
LPP-221ENST00000618621 MT1FP04733 61 aa1.2□□□□□ -2.22
LPP-221ENST00000618621 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
LPP-221ENST00000618621 LCE3CQ5T5A8 94 aa1.19□□□□□ -2.22
LPP-221ENST00000618621 SSPOA2VEC9 5147 aa1.19□□□□□ -2.22
LPP-221ENST00000618621 LCE5AQ5TCM9 118 aa1.19□□□□□ -2.22
LPP-221ENST00000618621 KRTAP19-5Q3LI72 72 aa1.17□□□□□ -2.22
LPP-221ENST00000618621 LCE1FQ5T754 118 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms