RNA–Protein interactions for RNA: ENST00000613314.1

PCDHGA12-202, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA12, Length 2,634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-202ENST00000613314 S4R3F8 94 aa8.56□□□□□ -1.04
PCDHGA12-202ENST00000613314 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
PCDHGA12-202ENST00000613314 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
PCDHGA12-202ENST00000613314 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
PCDHGA12-202ENST00000613314 HYDINQ4G0P3 5121 aa8.46□□□□□ -1.06
PCDHGA12-202ENST00000613314 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
PCDHGA12-202ENST00000613314 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
PCDHGA12-202ENST00000613314 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
PCDHGA12-202ENST00000613314 XP32Q5T750 250 aa8.4□□□□□ -1.06
PCDHGA12-202ENST00000613314 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
PCDHGA12-202ENST00000613314 SMR3BP02814 79 aaPredicted RBP8.31□□□□□ -1.08
PCDHGA12-202ENST00000613314 FAT1Q14517 4588 aa8.29□□□□□ -1.08
PCDHGA12-202ENST00000613314 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
PCDHGA12-202ENST00000613314 DYNC1H1Q14204 4646 aaKnown RBP8.25□□□□□ -1.09
PCDHGA12-202ENST00000613314 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
PCDHGA12-202ENST00000613314 HSPG2P98160 4391 aa8.24□□□□□ -1.09
PCDHGA12-202ENST00000613314 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
PCDHGA12-202ENST00000613314 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
PCDHGA12-202ENST00000613314 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
PCDHGA12-202ENST00000613314 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
PCDHGA12-202ENST00000613314 M0QZ58 72 aa8.09□□□□□ -1.11
PCDHGA12-202ENST00000613314 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
PCDHGA12-202ENST00000613314 TNXBP22105 4242 aa8.06□□□□□ -1.12
PCDHGA12-202ENST00000613314 KMT2CQ8NEZ4 4911 aaKnown RBP7.99□□□□□ -1.13
PCDHGA12-202ENST00000613314 LPAP08519 4548 aa7.96□□□□□ -1.14
PCDHGA12-202ENST00000613314 RYR2Q92736 4967 aa7.87□□□□□ -1.15
PCDHGA12-202ENST00000613314 R4GN34 69 aa7.83□□□□□ -1.16
PCDHGA12-202ENST00000613314 RYR3Q15413 4870 aa7.8□□□□□ -1.16
PCDHGA12-202ENST00000613314 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
PCDHGA12-202ENST00000613314 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.17
PCDHGA12-202ENST00000613314 LRP2P98164 4655 aa7.71□□□□□ -1.17
PCDHGA12-202ENST00000613314 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
PCDHGA12-202ENST00000613314 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
PCDHGA12-202ENST00000613314 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
PCDHGA12-202ENST00000613314 Q5VSD8 79 aa7.51□□□□□ -1.21
PCDHGA12-202ENST00000613314 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
PCDHGA12-202ENST00000613314 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.22
PCDHGA12-202ENST00000613314 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
PCDHGA12-202ENST00000613314 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
PCDHGA12-202ENST00000613314 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
PCDHGA12-202ENST00000613314 RYR1P21817 5038 aa7.38□□□□□ -1.23
PCDHGA12-202ENST00000613314 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
PCDHGA12-202ENST00000613314 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
PCDHGA12-202ENST00000613314 TNP1P09430 55 aa7.27□□□□□ -1.25
PCDHGA12-202ENST00000613314 J3QL48 77 aa7.26□□□□□ -1.25
PCDHGA12-202ENST00000613314 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
PCDHGA12-202ENST00000613314 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
PCDHGA12-202ENST00000613314 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
PCDHGA12-202ENST00000613314 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
PCDHGA12-202ENST00000613314 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
PCDHGA12-202ENST00000613314 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
PCDHGA12-202ENST00000613314 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
PCDHGA12-202ENST00000613314 HERC2O95714 4834 aa7.03□□□□□ -1.28
PCDHGA12-202ENST00000613314 INE1O15225 51 aa6.98□□□□□ -1.29
PCDHGA12-202ENST00000613314 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
PCDHGA12-202ENST00000613314 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
PCDHGA12-202ENST00000613314 MUC2Q02817 5179 aa6.9□□□□□ -1.31
PCDHGA12-202ENST00000613314 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
PCDHGA12-202ENST00000613314 HERC1Q15751 4861 aa6.85□□□□□ -1.31
PCDHGA12-202ENST00000613314 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
PCDHGA12-202ENST00000613314 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
PCDHGA12-202ENST00000613314 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
PCDHGA12-202ENST00000613314 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
PCDHGA12-202ENST00000613314 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
PCDHGA12-202ENST00000613314 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
PCDHGA12-202ENST00000613314 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
PCDHGA12-202ENST00000613314 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
PCDHGA12-202ENST00000613314 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
PCDHGA12-202ENST00000613314 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
PCDHGA12-202ENST00000613314 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
PCDHGA12-202ENST00000613314 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
PCDHGA12-202ENST00000613314 MT1XP80297 61 aa6.31□□□□□ -1.4
PCDHGA12-202ENST00000613314 MT1FP04733 61 aa6.29□□□□□ -1.4
PCDHGA12-202ENST00000613314 M0R2T5 61 aa6.28□□□□□ -1.4
PCDHGA12-202ENST00000613314 LCE2BO14633 110 aa6.27□□□□□ -1.41
PCDHGA12-202ENST00000613314 MT2AP02795 61 aa6.24□□□□□ -1.41
PCDHGA12-202ENST00000613314 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
PCDHGA12-202ENST00000613314 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
PCDHGA12-202ENST00000613314 MT1BP07438 61 aa6.21□□□□□ -1.42
PCDHGA12-202ENST00000613314 MT1HP80294 61 aa6.16□□□□□ -1.42
PCDHGA12-202ENST00000613314 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PCDHGA12-202ENST00000613314 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
PCDHGA12-202ENST00000613314 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
PCDHGA12-202ENST00000613314 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
PCDHGA12-202ENST00000613314 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
PCDHGA12-202ENST00000613314 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
PCDHGA12-202ENST00000613314 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
PCDHGA12-202ENST00000613314 KMT2DO14686 5537 aa5.93□□□□□ -1.46
PCDHGA12-202ENST00000613314 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
PCDHGA12-202ENST00000613314 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
PCDHGA12-202ENST00000613314 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
PCDHGA12-202ENST00000613314 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
PCDHGA12-202ENST00000613314 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
PCDHGA12-202ENST00000613314 USH2AO75445 5202 aa5.66□□□□□ -1.5
PCDHGA12-202ENST00000613314 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
PCDHGA12-202ENST00000613314 MT1LQ93083 61 aa5.49□□□□□ -1.53
PCDHGA12-202ENST00000613314 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
PCDHGA12-202ENST00000613314 MT1EP04732 61 aa5.39□□□□□ -1.55
PCDHGA12-202ENST00000613314 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
PCDHGA12-202ENST00000613314 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms