RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
TNXB-209ENST00000613214 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
TNXB-209ENST00000613214 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
TNXB-209ENST00000613214 ZNF469Q96JG9 3925 aaPredicted RBP6.43□□□□□ -1.38
TNXB-209ENST00000613214 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
TNXB-209ENST00000613214 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
TNXB-209ENST00000613214 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
TNXB-209ENST00000613214 MT1HP80294 61 aa6.18□□□□□ -1.42
TNXB-209ENST00000613214 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.42
TNXB-209ENST00000613214 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
TNXB-209ENST00000613214 DNAH1Q9P2D7 4330 aa6.1□□□□□ -1.43
TNXB-209ENST00000613214 DNAH2Q9P225 4427 aa6.07□□□□□ -1.44
TNXB-209ENST00000613214 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
TNXB-209ENST00000613214 DNAH10Q8IVF4 4471 aa6.02□□□□□ -1.45
TNXB-209ENST00000613214 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
TNXB-209ENST00000613214 MT2AP02795 61 aa6□□□□□ -1.45
TNXB-209ENST00000613214 SPRR2EP22531 72 aa5.99□□□□□ -1.45
TNXB-209ENST00000613214 SPRR2BP35325 72 aa5.99□□□□□ -1.45
TNXB-209ENST00000613214 SPRR2AP35326 72 aa5.99□□□□□ -1.45
TNXB-209ENST00000613214 FRAS1Q86XX4 4008 aa5.95□□□□□ -1.46
TNXB-209ENST00000613214 ANK2Q01484 3957 aa5.94□□□□□ -1.46
TNXB-209ENST00000613214 MT1FP04733 61 aa5.93□□□□□ -1.46
TNXB-209ENST00000613214 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
TNXB-209ENST00000613214 PLECQ15149 4684 aaKnown RBP5.91□□□□□ -1.46
TNXB-209ENST00000613214 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
TNXB-209ENST00000613214 VPS13BQ7Z7G8 4022 aa5.86□□□□□ -1.47
TNXB-209ENST00000613214 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.47
TNXB-209ENST00000613214 KMT2AQ03164 3969 aa5.84□□□□□ -1.48
TNXB-209ENST00000613214 DNAH3Q8TD57 4116 aa5.83□□□□□ -1.48
TNXB-209ENST00000613214 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
TNXB-209ENST00000613214 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
TNXB-209ENST00000613214 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
TNXB-209ENST00000613214 SPRR2DP22532 72 aa5.77□□□□□ -1.49
TNXB-209ENST00000613214 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
TNXB-209ENST00000613214 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
TNXB-209ENST00000613214 DNHD1Q96M86 4753 aa5.71□□□□□ -1.5
TNXB-209ENST00000613214 VPS13DQ5THJ4 4388 aa5.7□□□□□ -1.5
TNXB-209ENST00000613214 MT1GP13640 62 aa5.7□□□□□ -1.5
TNXB-209ENST00000613214 DNAH17Q9UFH2 4485 aa5.69□□□□□ -1.5
TNXB-209ENST00000613214 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
TNXB-209ENST00000613214 LYSTQ99698 3801 aa5.68□□□□□ -1.5
TNXB-209ENST00000613214 PRKDCP78527 4128 aaKnown RBP5.68□□□□□ -1.5
TNXB-209ENST00000613214 FAT1Q14517 4588 aa5.66□□□□□ -1.5
TNXB-209ENST00000613214 LCE2BO14633 110 aa5.6□□□□□ -1.51
TNXB-209ENST00000613214 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
TNXB-209ENST00000613214 CMYA5Q8N3K9 4069 aa5.59□□□□□ -1.51
TNXB-209ENST00000613214 DYNC1H1Q14204 4646 aaKnown RBP5.58□□□□□ -1.52
TNXB-209ENST00000613214 DYNC2H1Q8NCM8 4307 aaKnown RBP5.55□□□□□ -1.52
TNXB-209ENST00000613214 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
TNXB-209ENST00000613214 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
TNXB-209ENST00000613214 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
TNXB-209ENST00000613214 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
TNXB-209ENST00000613214 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
TNXB-209ENST00000613214 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
TNXB-209ENST00000613214 RYR1P21817 5038 aa5.46□□□□□ -1.54
TNXB-209ENST00000613214 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
TNXB-209ENST00000613214 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.54
TNXB-209ENST00000613214 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
TNXB-209ENST00000613214 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
TNXB-209ENST00000613214 MT1XP80297 61 aa5.32□□□□□ -1.56
TNXB-209ENST00000613214 MT4P47944 62 aa5.32□□□□□ -1.56
TNXB-209ENST00000613214 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
TNXB-209ENST00000613214 LPAP08519 4548 aa5.29□□□□□ -1.56
TNXB-209ENST00000613214 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
TNXB-209ENST00000613214 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
TNXB-209ENST00000613214 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
TNXB-209ENST00000613214 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
TNXB-209ENST00000613214 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
TNXB-209ENST00000613214 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
TNXB-209ENST00000613214 MT1BP07438 61 aa5.17□□□□□ -1.58
TNXB-209ENST00000613214 RYR3Q15413 4870 aa5.16□□□□□ -1.58
TNXB-209ENST00000613214 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.58
TNXB-209ENST00000613214 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
TNXB-209ENST00000613214 PKD1P98161 4303 aa5.1□□□□□ -1.59
TNXB-209ENST00000613214 HSPG2P98160 4391 aa5.1□□□□□ -1.59
TNXB-209ENST00000613214 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
TNXB-209ENST00000613214 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
TNXB-209ENST00000613214 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
TNXB-209ENST00000613214 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
TNXB-209ENST00000613214 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TNXB-209ENST00000613214 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
TNXB-209ENST00000613214 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
TNXB-209ENST00000613214 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
TNXB-209ENST00000613214 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
TNXB-209ENST00000613214 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
TNXB-209ENST00000613214 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
TNXB-209ENST00000613214 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
TNXB-209ENST00000613214 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
TNXB-209ENST00000613214 PRM1P04553 51 aa4.91□□□□□ -1.62
TNXB-209ENST00000613214 LRP2P98164 4655 aa4.89□□□□□ -1.63
TNXB-209ENST00000613214 MT1LQ93083 61 aa4.85□□□□□ -1.63
TNXB-209ENST00000613214 TNXBP22105 4242 aa4.81□□□□□ -1.64
TNXB-209ENST00000613214 MT1EP04732 61 aa4.79□□□□□ -1.64
TNXB-209ENST00000613214 RYR2Q92736 4967 aa4.79□□□□□ -1.64
TNXB-209ENST00000613214 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
TNXB-209ENST00000613214 HERC2O95714 4834 aa4.78□□□□□ -1.64
TNXB-209ENST00000613214 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
TNXB-209ENST00000613214 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
TNXB-209ENST00000613214 MT3P25713 68 aa4.74□□□□□ -1.65
TNXB-209ENST00000613214 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms