RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
NDFIP2-205ENST00000612570 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
NDFIP2-205ENST00000612570 KRTAP13-4Q3LI77 160 aa6.89□□□□□ -1.31
NDFIP2-205ENST00000612570 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
NDFIP2-205ENST00000612570 ANK2Q01484 3957 aa6.86□□□□□ -1.31
NDFIP2-205ENST00000612570 FAT1Q14517 4588 aa6.85□□□□□ -1.31
NDFIP2-205ENST00000612570 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
NDFIP2-205ENST00000612570 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
NDFIP2-205ENST00000612570 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
NDFIP2-205ENST00000612570 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
NDFIP2-205ENST00000612570 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
NDFIP2-205ENST00000612570 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
NDFIP2-205ENST00000612570 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
NDFIP2-205ENST00000612570 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
NDFIP2-205ENST00000612570 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
NDFIP2-205ENST00000612570 LYSTQ99698 3801 aa6.64□□□□□ -1.35
NDFIP2-205ENST00000612570 CMYA5Q8N3K9 4069 aa6.64□□□□□ -1.35
NDFIP2-205ENST00000612570 DYNC2H1Q8NCM8 4307 aaKnown RBP6.61□□□□□ -1.35
NDFIP2-205ENST00000612570 RYR1P21817 5038 aa6.59□□□□□ -1.35
NDFIP2-205ENST00000612570 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
NDFIP2-205ENST00000612570 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
NDFIP2-205ENST00000612570 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
NDFIP2-205ENST00000612570 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
NDFIP2-205ENST00000612570 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
NDFIP2-205ENST00000612570 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
NDFIP2-205ENST00000612570 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
NDFIP2-205ENST00000612570 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
NDFIP2-205ENST00000612570 RYR3Q15413 4870 aa6.44□□□□□ -1.38
NDFIP2-205ENST00000612570 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
NDFIP2-205ENST00000612570 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
NDFIP2-205ENST00000612570 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
NDFIP2-205ENST00000612570 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
NDFIP2-205ENST00000612570 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
NDFIP2-205ENST00000612570 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
NDFIP2-205ENST00000612570 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
NDFIP2-205ENST00000612570 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
NDFIP2-205ENST00000612570 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
NDFIP2-205ENST00000612570 RYR2Q92736 4967 aa6.29□□□□□ -1.4
NDFIP2-205ENST00000612570 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
NDFIP2-205ENST00000612570 PKHD1P08F94 4074 aa6.28□□□□□ -1.4
NDFIP2-205ENST00000612570 KRTAP10-12P60413 245 aa6.21□□□□□ -1.41
NDFIP2-205ENST00000612570 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
NDFIP2-205ENST00000612570 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
NDFIP2-205ENST00000612570 HERC2O95714 4834 aa6.1□□□□□ -1.43
NDFIP2-205ENST00000612570 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
NDFIP2-205ENST00000612570 LRP2P98164 4655 aa6.09□□□□□ -1.44
NDFIP2-205ENST00000612570 PKD1P98161 4303 aa6.07□□□□□ -1.44
NDFIP2-205ENST00000612570 HSPG2P98160 4391 aa6.04□□□□□ -1.44
NDFIP2-205ENST00000612570 MT1HP80294 61 aa6.03□□□□□ -1.44
NDFIP2-205ENST00000612570 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
NDFIP2-205ENST00000612570 MT2AP02795 61 aa5.96□□□□□ -1.46
NDFIP2-205ENST00000612570 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
NDFIP2-205ENST00000612570 INE1O15225 51 aa5.92□□□□□ -1.46
NDFIP2-205ENST00000612570 MT1FP04733 61 aa5.89□□□□□ -1.47
NDFIP2-205ENST00000612570 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
NDFIP2-205ENST00000612570 LPAP08519 4548 aa5.79□□□□□ -1.48
NDFIP2-205ENST00000612570 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
NDFIP2-205ENST00000612570 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
NDFIP2-205ENST00000612570 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
NDFIP2-205ENST00000612570 TNXBP22105 4242 aa5.71□□□□□ -1.5
NDFIP2-205ENST00000612570 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
NDFIP2-205ENST00000612570 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
NDFIP2-205ENST00000612570 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
NDFIP2-205ENST00000612570 HERC1Q15751 4861 aa5.68□□□□□ -1.5
NDFIP2-205ENST00000612570 PCLOQ9Y6V0 5065 aa5.67□□□□□ -1.5
NDFIP2-205ENST00000612570 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
NDFIP2-205ENST00000612570 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
NDFIP2-205ENST00000612570 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
NDFIP2-205ENST00000612570 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
NDFIP2-205ENST00000612570 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
NDFIP2-205ENST00000612570 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
NDFIP2-205ENST00000612570 MT1BP07438 61 aa5.48□□□□□ -1.53
NDFIP2-205ENST00000612570 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
NDFIP2-205ENST00000612570 MT1XP80297 61 aa5.45□□□□□ -1.54
NDFIP2-205ENST00000612570 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
NDFIP2-205ENST00000612570 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.55
NDFIP2-205ENST00000612570 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
NDFIP2-205ENST00000612570 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
NDFIP2-205ENST00000612570 MUC2Q02817 5179 aa5.32□□□□□ -1.56
NDFIP2-205ENST00000612570 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
NDFIP2-205ENST00000612570 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
NDFIP2-205ENST00000612570 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
NDFIP2-205ENST00000612570 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
NDFIP2-205ENST00000612570 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
NDFIP2-205ENST00000612570 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
NDFIP2-205ENST00000612570 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
NDFIP2-205ENST00000612570 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
NDFIP2-205ENST00000612570 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
NDFIP2-205ENST00000612570 LCE2BO14633 110 aa5.2□□□□□ -1.58
NDFIP2-205ENST00000612570 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
NDFIP2-205ENST00000612570 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
NDFIP2-205ENST00000612570 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
NDFIP2-205ENST00000612570 MT1GP13640 62 aa5.02□□□□□ -1.61
NDFIP2-205ENST00000612570 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
NDFIP2-205ENST00000612570 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
NDFIP2-205ENST00000612570 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
NDFIP2-205ENST00000612570 SPRR2EP22531 72 aa4.87□□□□□ -1.63
NDFIP2-205ENST00000612570 SPRR2BP35325 72 aa4.87□□□□□ -1.63
NDFIP2-205ENST00000612570 SPRR2AP35326 72 aa4.87□□□□□ -1.63
NDFIP2-205ENST00000612570 MT1LQ93083 61 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms