RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 TNP1P09430 55 aa3.5□□□□□ -1.85
PBX1-221ENST00000612123 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
PBX1-221ENST00000612123 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
PBX1-221ENST00000612123 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
PBX1-221ENST00000612123 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
PBX1-221ENST00000612123 LPAP08519 4548 aa3.45□□□□□ -1.86
PBX1-221ENST00000612123 PLECQ15149 4684 aaKnown RBP3.44□□□□□ -1.86
PBX1-221ENST00000612123 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
PBX1-221ENST00000612123 HSPG2P98160 4391 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
PBX1-221ENST00000612123 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
PBX1-221ENST00000612123 DYNC2H1Q8NCM8 4307 aaKnown RBP3.37□□□□□ -1.87
PBX1-221ENST00000612123 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
PBX1-221ENST00000612123 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
PBX1-221ENST00000612123 STARD9Q9P2P6 4700 aa3.35□□□□□ -1.87
PBX1-221ENST00000612123 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
PBX1-221ENST00000612123 DNHD1Q96M86 4753 aa3.33□□□□□ -1.88
PBX1-221ENST00000612123 APOBP04114 4563 aaKnown RBP3.31□□□□□ -1.88
PBX1-221ENST00000612123 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
PBX1-221ENST00000612123 FAT1Q14517 4588 aa3.3□□□□□ -1.88
PBX1-221ENST00000612123 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
PBX1-221ENST00000612123 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
PBX1-221ENST00000612123 DNAH5Q8TE73 4624 aa3.23□□□□□ -1.89
PBX1-221ENST00000612123 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
PBX1-221ENST00000612123 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
PBX1-221ENST00000612123 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
PBX1-221ENST00000612123 MUC2Q02817 5179 aa3.18□□□□□ -1.9
PBX1-221ENST00000612123 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
PBX1-221ENST00000612123 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
PBX1-221ENST00000612123 DYNC1H1Q14204 4646 aaKnown RBP3.14□□□□□ -1.91
PBX1-221ENST00000612123 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
PBX1-221ENST00000612123 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
PBX1-221ENST00000612123 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
PBX1-221ENST00000612123 RYR1P21817 5038 aa3.13□□□□□ -1.91
PBX1-221ENST00000612123 RYR2Q92736 4967 aa3.13□□□□□ -1.91
PBX1-221ENST00000612123 KRTAP3-3Q9BYR6 98 aa3.12□□□□□ -1.91
PBX1-221ENST00000612123 LRP2P98164 4655 aa3.12□□□□□ -1.91
PBX1-221ENST00000612123 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
PBX1-221ENST00000612123 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
PBX1-221ENST00000612123 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
PBX1-221ENST00000612123 LCE2DQ5TA82 110 aaPredicted RBP3.04□□□□□ -1.92
PBX1-221ENST00000612123 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
PBX1-221ENST00000612123 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
PBX1-221ENST00000612123 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
PBX1-221ENST00000612123 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
PBX1-221ENST00000612123 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
PBX1-221ENST00000612123 PKD1P98161 4303 aa2.99□□□□□ -1.93
PBX1-221ENST00000612123 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
PBX1-221ENST00000612123 HERC2O95714 4834 aa2.95□□□□□ -1.94
PBX1-221ENST00000612123 RYR3Q15413 4870 aa2.94□□□□□ -1.94
PBX1-221ENST00000612123 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
PBX1-221ENST00000612123 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
PBX1-221ENST00000612123 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
PBX1-221ENST00000612123 TNXBP22105 4242 aa2.91□□□□□ -1.94
PBX1-221ENST00000612123 KMT2DO14686 5537 aa2.91□□□□□ -1.94
PBX1-221ENST00000612123 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
PBX1-221ENST00000612123 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
PBX1-221ENST00000612123 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
PBX1-221ENST00000612123 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
PBX1-221ENST00000612123 UBR4Q5T4S7 5183 aa2.82□□□□□ -1.96
PBX1-221ENST00000612123 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
PBX1-221ENST00000612123 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
PBX1-221ENST00000612123 MT1HP80294 61 aa2.79□□□□□ -1.96
PBX1-221ENST00000612123 PCLOQ9Y6V0 5065 aa2.79□□□□□ -1.96
PBX1-221ENST00000612123 HERC1Q15751 4861 aa2.78□□□□□ -1.96
PBX1-221ENST00000612123 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
PBX1-221ENST00000612123 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
PBX1-221ENST00000612123 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
PBX1-221ENST00000612123 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
PBX1-221ENST00000612123 MT2AP02795 61 aa2.75□□□□□ -1.97
PBX1-221ENST00000612123 INE1O15225 51 aa2.74□□□□□ -1.97
PBX1-221ENST00000612123 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
PBX1-221ENST00000612123 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
PBX1-221ENST00000612123 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
PBX1-221ENST00000612123 USH2AO75445 5202 aa2.72□□□□□ -1.97
PBX1-221ENST00000612123 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
PBX1-221ENST00000612123 MT1FP04733 61 aa2.66□□□□□ -1.98
PBX1-221ENST00000612123 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PBX1-221ENST00000612123 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
PBX1-221ENST00000612123 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
PBX1-221ENST00000612123 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
PBX1-221ENST00000612123 LCE2AQ5TA79 106 aaPredicted RBP2.61□□□□□ -1.99
PBX1-221ENST00000612123 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
PBX1-221ENST00000612123 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
PBX1-221ENST00000612123 LCE2CQ5TA81 110 aa2.59□□□□□ -2
PBX1-221ENST00000612123 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
PBX1-221ENST00000612123 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
PBX1-221ENST00000612123 SPRR2EP22531 72 aa2.54□□□□□ -2
PBX1-221ENST00000612123 SPRR2BP35325 72 aa2.54□□□□□ -2
PBX1-221ENST00000612123 SPRR2AP35326 72 aa2.54□□□□□ -2
PBX1-221ENST00000612123 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
PBX1-221ENST00000612123 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.53□□□□□ -2
PBX1-221ENST00000612123 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
PBX1-221ENST00000612123 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
PBX1-221ENST00000612123 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms