RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 RYR3Q15413 4870 aa5.81□□□□□ -1.48
CDH4-202ENST00000611855 RYR2Q92736 4967 aa5.8□□□□□ -1.48
CDH4-202ENST00000611855 C20orf166-AS1Q96NR2 134 aa5.8□□□□□ -1.48
CDH4-202ENST00000611855 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
CDH4-202ENST00000611855 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
CDH4-202ENST00000611855 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
CDH4-202ENST00000611855 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.49
CDH4-202ENST00000611855 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
CDH4-202ENST00000611855 LRP1Q07954 4544 aaKnown RBP5.68□□□□□ -1.5
CDH4-202ENST00000611855 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CDH4-202ENST00000611855 HSPG2P98160 4391 aa5.67□□□□□ -1.5
CDH4-202ENST00000611855 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
CDH4-202ENST00000611855 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
CDH4-202ENST00000611855 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.5
CDH4-202ENST00000611855 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
CDH4-202ENST00000611855 S4R3F8 94 aa5.64□□□□□ -1.51
CDH4-202ENST00000611855 KIAA1109Q2LD37 5005 aa5.64□□□□□ -1.51
CDH4-202ENST00000611855 KRTAP12-2P59991 146 aa5.63□□□□□ -1.51
CDH4-202ENST00000611855 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
CDH4-202ENST00000611855 KRTAP10-4P60372 401 aaPredicted RBP5.61□□□□□ -1.51
CDH4-202ENST00000611855 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
CDH4-202ENST00000611855 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
CDH4-202ENST00000611855 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
CDH4-202ENST00000611855 J3QL48 77 aa5.55□□□□□ -1.52
CDH4-202ENST00000611855 LPAP08519 4548 aa5.5□□□□□ -1.53
CDH4-202ENST00000611855 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
CDH4-202ENST00000611855 XP32Q5T750 250 aa5.49□□□□□ -1.53
CDH4-202ENST00000611855 RYR1P21817 5038 aa5.48□□□□□ -1.53
CDH4-202ENST00000611855 TNXBP22105 4242 aa5.48□□□□□ -1.53
CDH4-202ENST00000611855 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
CDH4-202ENST00000611855 Q5VSD8 79 aa5.43□□□□□ -1.54
CDH4-202ENST00000611855 LRP2P98164 4655 aa5.41□□□□□ -1.54
CDH4-202ENST00000611855 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
CDH4-202ENST00000611855 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
CDH4-202ENST00000611855 M0QZ58 72 aa5.34□□□□□ -1.55
CDH4-202ENST00000611855 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
CDH4-202ENST00000611855 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
CDH4-202ENST00000611855 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
CDH4-202ENST00000611855 HERC2O95714 4834 aa5.3□□□□□ -1.56
CDH4-202ENST00000611855 R4GN34 69 aa5.28□□□□□ -1.56
CDH4-202ENST00000611855 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
CDH4-202ENST00000611855 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
CDH4-202ENST00000611855 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
CDH4-202ENST00000611855 HERC1Q15751 4861 aa5.18□□□□□ -1.58
CDH4-202ENST00000611855 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
CDH4-202ENST00000611855 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
CDH4-202ENST00000611855 MUC2Q02817 5179 aa5.04□□□□□ -1.6
CDH4-202ENST00000611855 KRTAP4-1Q9BYQ7 146 aa5.02□□□□□ -1.61
CDH4-202ENST00000611855 MUC17Q685J3 4493 aa5□□□□□ -1.61
CDH4-202ENST00000611855 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
CDH4-202ENST00000611855 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
CDH4-202ENST00000611855 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
CDH4-202ENST00000611855 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
CDH4-202ENST00000611855 TNP1P09430 55 aa4.85□□□□□ -1.63
CDH4-202ENST00000611855 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
CDH4-202ENST00000611855 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
CDH4-202ENST00000611855 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
CDH4-202ENST00000611855 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
CDH4-202ENST00000611855 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
CDH4-202ENST00000611855 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
CDH4-202ENST00000611855 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
CDH4-202ENST00000611855 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
CDH4-202ENST00000611855 M0R2T5 61 aa4.56□□□□□ -1.68
CDH4-202ENST00000611855 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
CDH4-202ENST00000611855 INE1O15225 51 aa4.47□□□□□ -1.69
CDH4-202ENST00000611855 LCE2CQ5TA81 110 aa4.47□□□□□ -1.69
CDH4-202ENST00000611855 SPRR2GQ9BYE4 73 aa4.47□□□□□ -1.69
CDH4-202ENST00000611855 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
CDH4-202ENST00000611855 MT1FP04733 61 aa4.4□□□□□ -1.7
CDH4-202ENST00000611855 MT2AP02795 61 aa4.36□□□□□ -1.71
CDH4-202ENST00000611855 MT1HP80294 61 aa4.36□□□□□ -1.71
CDH4-202ENST00000611855 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
CDH4-202ENST00000611855 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
CDH4-202ENST00000611855 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
CDH4-202ENST00000611855 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
CDH4-202ENST00000611855 MT1XP80297 61 aa4.28□□□□□ -1.72
CDH4-202ENST00000611855 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
CDH4-202ENST00000611855 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
CDH4-202ENST00000611855 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CDH4-202ENST00000611855 USH2AO75445 5202 aa4.26□□□□□ -1.73
CDH4-202ENST00000611855 MT1BP07438 61 aa4.25□□□□□ -1.73
CDH4-202ENST00000611855 KMT2DO14686 5537 aa4.23□□□□□ -1.73
CDH4-202ENST00000611855 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
CDH4-202ENST00000611855 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
CDH4-202ENST00000611855 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
CDH4-202ENST00000611855 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
CDH4-202ENST00000611855 LCE2BO14633 110 aa4.04□□□□□ -1.76
CDH4-202ENST00000611855 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
CDH4-202ENST00000611855 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CDH4-202ENST00000611855 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
CDH4-202ENST00000611855 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
CDH4-202ENST00000611855 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
CDH4-202ENST00000611855 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
CDH4-202ENST00000611855 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
CDH4-202ENST00000611855 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
CDH4-202ENST00000611855 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
CDH4-202ENST00000611855 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
CDH4-202ENST00000611855 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
CDH4-202ENST00000611855 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
CDH4-202ENST00000611855 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms