RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 DNAH11Q96DT5 4516 aa2.04□□□□□ -2.08
RNF38-210ENST00000611646 LPAP08519 4548 aa2.04□□□□□ -2.08
RNF38-210ENST00000611646 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
RNF38-210ENST00000611646 H0YAA0 97 aa2.04□□□□□ -2.08
RNF38-210ENST00000611646 KRTAP16-1A8MUX0 517 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 LCE2CQ5TA81 110 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 HSPG2P98160 4391 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 MUC2Q02817 5179 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 A8MUU9 505 aa2.03□□□□□ -2.08
RNF38-210ENST00000611646 SEC61BP60468 96 aaKnown RBP2.02□□□□□ -2.09
RNF38-210ENST00000611646 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
RNF38-210ENST00000611646 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
RNF38-210ENST00000611646 C20orf166-AS1Q96NR2 134 aa2.02□□□□□ -2.09
RNF38-210ENST00000611646 ALMS1Q8TCU4 4167 aa2.01□□□□□ -2.09
RNF38-210ENST00000611646 KRTAP23-1A1A580 65 aa2.01□□□□□ -2.09
RNF38-210ENST00000611646 NDUFAF8A1L188 74 aa2.01□□□□□ -2.09
RNF38-210ENST00000611646 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
RNF38-210ENST00000611646 KRTAP13-3Q3SY46 172 aa2□□□□□ -2.09
RNF38-210ENST00000611646 XP32Q5T750 250 aa2□□□□□ -2.09
RNF38-210ENST00000611646 SACSQ9NZJ4 4579 aa2□□□□□ -2.09
RNF38-210ENST00000611646 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
RNF38-210ENST00000611646 P0C880 135 aa1.98□□□□□ -2.09
RNF38-210ENST00000611646 A0A1B0GVY2 172 aa1.98□□□□□ -2.09
RNF38-210ENST00000611646 KRTAP19-4Q3LI73 84 aa1.96□□□□□ -2.1
RNF38-210ENST00000611646 LOC100996750A0A140TA64 210 aa1.95□□□□□ -2.1
RNF38-210ENST00000611646 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
RNF38-210ENST00000611646 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
RNF38-210ENST00000611646 RYR2Q92736 4967 aa1.94□□□□□ -2.1
RNF38-210ENST00000611646 LORP23490 312 aaPredicted RBP1.94□□□□□ -2.1
RNF38-210ENST00000611646 LRP1BQ9NZR2 4599 aa1.94□□□□□ -2.1
RNF38-210ENST00000611646 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
RNF38-210ENST00000611646 KRTAP3-1Q9BYR8 98 aa1.93□□□□□ -2.1
RNF38-210ENST00000611646 LCE2AQ5TA79 106 aaPredicted RBP1.93□□□□□ -2.1
RNF38-210ENST00000611646 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
RNF38-210ENST00000611646 KRTAP10-8P60410 259 aa1.92□□□□□ -2.1
RNF38-210ENST00000611646 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
RNF38-210ENST00000611646 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
RNF38-210ENST00000611646 HERC1Q15751 4861 aa1.89□□□□□ -2.11
RNF38-210ENST00000611646 LRP1Q07954 4544 aaKnown RBP1.89□□□□□ -2.11
RNF38-210ENST00000611646 TNP1P09430 55 aa1.88□□□□□ -2.11
RNF38-210ENST00000611646 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
RNF38-210ENST00000611646 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
RNF38-210ENST00000611646 FAT1Q14517 4588 aa1.88□□□□□ -2.11
RNF38-210ENST00000611646 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
RNF38-210ENST00000611646 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
RNF38-210ENST00000611646 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
RNF38-210ENST00000611646 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
RNF38-210ENST00000611646 KRTAP10-6P60371 365 aaPredicted RBP1.85□□□□□ -2.11
RNF38-210ENST00000611646 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
RNF38-210ENST00000611646 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
RNF38-210ENST00000611646 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
RNF38-210ENST00000611646 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
RNF38-210ENST00000611646 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
RNF38-210ENST00000611646 KRTAP10-4P60372 401 aaPredicted RBP1.79□□□□□ -2.12
RNF38-210ENST00000611646 KIAA1109Q2LD37 5005 aa1.79□□□□□ -2.12
RNF38-210ENST00000611646 MT1HL1P0DM35 61 aa1.78□□□□□ -2.12
RNF38-210ENST00000611646 TNXBP22105 4242 aa1.78□□□□□ -2.12
RNF38-210ENST00000611646 HMCN2Q8NDA2 5059 aa1.76□□□□□ -2.13
RNF38-210ENST00000611646 KRTAP15-1Q3LI76 137 aa1.75□□□□□ -2.13
RNF38-210ENST00000611646 HERC2O95714 4834 aa1.73□□□□□ -2.13
RNF38-210ENST00000611646 LRP2P98164 4655 aa1.73□□□□□ -2.13
RNF38-210ENST00000611646 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
RNF38-210ENST00000611646 USH2AO75445 5202 aa1.7□□□□□ -2.14
RNF38-210ENST00000611646 LCE3BQ5TA77 95 aa1.7□□□□□ -2.14
RNF38-210ENST00000611646 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
RNF38-210ENST00000611646 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
RNF38-210ENST00000611646 LCE3AQ5TA76 89 aa1.64□□□□□ -2.15
RNF38-210ENST00000611646 FLGP20930 4061 aaPredicted RBP1.64□□□□□ -2.15
RNF38-210ENST00000611646 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
RNF38-210ENST00000611646 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
RNF38-210ENST00000611646 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
RNF38-210ENST00000611646 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
RNF38-210ENST00000611646 KMT2DO14686 5537 aa1.57□□□□□ -2.16
RNF38-210ENST00000611646 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
RNF38-210ENST00000611646 KRTAP4-8Q9BYQ9 185 aa1.55□□□□□ -2.16
RNF38-210ENST00000611646 KRTAP9-9Q9BYP9 154 aa1.55□□□□□ -2.16
RNF38-210ENST00000611646 KRTAP9-4Q9BYQ2 154 aa1.55□□□□□ -2.16
RNF38-210ENST00000611646 MT3P25713 68 aa1.54□□□□□ -2.16
RNF38-210ENST00000611646 MT1HP80294 61 aa1.54□□□□□ -2.16
RNF38-210ENST00000611646 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.53□□□□□ -2.16
RNF38-210ENST00000611646 MT2AP02795 61 aa1.53□□□□□ -2.17
RNF38-210ENST00000611646 MT1FP04733 61 aa1.53□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP9-8Q9BYQ0 159 aa1.53□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
RNF38-210ENST00000611646 INE1O15225 51 aa1.5□□□□□ -2.17
RNF38-210ENST00000611646 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
RNF38-210ENST00000611646 LCE4AQ5TA78 99 aa1.49□□□□□ -2.17
RNF38-210ENST00000611646 SPRR2GQ9BYE4 73 aa1.49□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP4-7Q9BYR0 210 aa1.49□□□□□ -2.17
RNF38-210ENST00000611646 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP9-6A0A140TA67 174 aa1.48□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP10-5P60370 271 aa1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP19-5Q3LI72 72 aa1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP19-1Q8IUB9 90 aa1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP4-2Q9BYR5 136 aa1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP9-7A8MTY7 169 aa1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP10-7P60409 375 aaPredicted RBP1.47□□□□□ -2.17
RNF38-210ENST00000611646 KRTAP4-8A0A0G2JLE6 195 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms