RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
TNXB-208ENST00000611016 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.34
TNXB-208ENST00000611016 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
TNXB-208ENST00000611016 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
TNXB-208ENST00000611016 CSMD3Q7Z407 3707 aa6.51□□□□□ -1.37
TNXB-208ENST00000611016 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
TNXB-208ENST00000611016 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
TNXB-208ENST00000611016 AKAP9Q99996 3911 aa6.43□□□□□ -1.38
TNXB-208ENST00000611016 MT1HP80294 61 aa6.42□□□□□ -1.38
TNXB-208ENST00000611016 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
TNXB-208ENST00000611016 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.39
TNXB-208ENST00000611016 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
TNXB-208ENST00000611016 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
TNXB-208ENST00000611016 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
TNXB-208ENST00000611016 MT2AP02795 61 aa6.29□□□□□ -1.4
TNXB-208ENST00000611016 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
TNXB-208ENST00000611016 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
TNXB-208ENST00000611016 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
TNXB-208ENST00000611016 DNAH17Q9UFH2 4485 aa6.25□□□□□ -1.41
TNXB-208ENST00000611016 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
TNXB-208ENST00000611016 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
TNXB-208ENST00000611016 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
TNXB-208ENST00000611016 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
TNXB-208ENST00000611016 MT1FP04733 61 aa6.16□□□□□ -1.42
TNXB-208ENST00000611016 FAT2Q9NYQ8 4349 aa6.14□□□□□ -1.43
TNXB-208ENST00000611016 FAT1Q14517 4588 aa6.12□□□□□ -1.43
TNXB-208ENST00000611016 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
TNXB-208ENST00000611016 RYR1P21817 5038 aa6.1□□□□□ -1.43
TNXB-208ENST00000611016 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
TNXB-208ENST00000611016 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
TNXB-208ENST00000611016 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
TNXB-208ENST00000611016 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
TNXB-208ENST00000611016 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
TNXB-208ENST00000611016 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
TNXB-208ENST00000611016 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.46
TNXB-208ENST00000611016 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
TNXB-208ENST00000611016 PRKDCP78527 4128 aaKnown RBP5.91□□□□□ -1.46
TNXB-208ENST00000611016 ANK2Q01484 3957 aa5.9□□□□□ -1.46
TNXB-208ENST00000611016 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.47
TNXB-208ENST00000611016 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
TNXB-208ENST00000611016 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
TNXB-208ENST00000611016 RYR3Q15413 4870 aa5.84□□□□□ -1.48
TNXB-208ENST00000611016 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
TNXB-208ENST00000611016 SPRR2EP22531 72 aa5.76□□□□□ -1.49
TNXB-208ENST00000611016 SPRR2BP35325 72 aa5.76□□□□□ -1.49
TNXB-208ENST00000611016 SPRR2AP35326 72 aa5.76□□□□□ -1.49
TNXB-208ENST00000611016 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
TNXB-208ENST00000611016 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
TNXB-208ENST00000611016 LYSTQ99698 3801 aa5.73□□□□□ -1.49
TNXB-208ENST00000611016 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.49
TNXB-208ENST00000611016 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
TNXB-208ENST00000611016 DNAH6Q9C0G6 4158 aa5.71□□□□□ -1.5
TNXB-208ENST00000611016 HERC1Q15751 4861 aa5.62□□□□□ -1.51
TNXB-208ENST00000611016 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
TNXB-208ENST00000611016 CMYA5Q8N3K9 4069 aa5.61□□□□□ -1.51
TNXB-208ENST00000611016 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
TNXB-208ENST00000611016 MT1XP80297 61 aa5.6□□□□□ -1.51
TNXB-208ENST00000611016 RYR2Q92736 4967 aa5.58□□□□□ -1.52
TNXB-208ENST00000611016 SPRR2DP22532 72 aa5.57□□□□□ -1.52
TNXB-208ENST00000611016 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
TNXB-208ENST00000611016 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
TNXB-208ENST00000611016 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
TNXB-208ENST00000611016 MT1BP07438 61 aa5.55□□□□□ -1.52
TNXB-208ENST00000611016 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
TNXB-208ENST00000611016 LCE2BO14633 110 aa5.51□□□□□ -1.53
TNXB-208ENST00000611016 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
TNXB-208ENST00000611016 MT1GP13640 62 aa5.5□□□□□ -1.53
TNXB-208ENST00000611016 HSPG2P98160 4391 aa5.48□□□□□ -1.53
TNXB-208ENST00000611016 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
TNXB-208ENST00000611016 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
TNXB-208ENST00000611016 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
TNXB-208ENST00000611016 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
TNXB-208ENST00000611016 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
TNXB-208ENST00000611016 HERC2O95714 4834 aa5.4□□□□□ -1.54
TNXB-208ENST00000611016 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
TNXB-208ENST00000611016 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
TNXB-208ENST00000611016 PKD1P98161 4303 aa5.37□□□□□ -1.55
TNXB-208ENST00000611016 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
TNXB-208ENST00000611016 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
TNXB-208ENST00000611016 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
TNXB-208ENST00000611016 LRP2P98164 4655 aa5.26□□□□□ -1.57
TNXB-208ENST00000611016 LPAP08519 4548 aa5.24□□□□□ -1.57
TNXB-208ENST00000611016 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
TNXB-208ENST00000611016 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
TNXB-208ENST00000611016 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
TNXB-208ENST00000611016 PKHD1P08F94 4074 aa5.15□□□□□ -1.59
TNXB-208ENST00000611016 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
TNXB-208ENST00000611016 MT1LQ93083 61 aa5.11□□□□□ -1.59
TNXB-208ENST00000611016 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
TNXB-208ENST00000611016 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
TNXB-208ENST00000611016 MT1EP04732 61 aa5.06□□□□□ -1.6
TNXB-208ENST00000611016 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
TNXB-208ENST00000611016 TNXBP22105 4242 aa5.03□□□□□ -1.6
TNXB-208ENST00000611016 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
TNXB-208ENST00000611016 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
TNXB-208ENST00000611016 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
TNXB-208ENST00000611016 MT4P47944 62 aa4.96□□□□□ -1.62
TNXB-208ENST00000611016 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
TNXB-208ENST00000611016 MT1MQ8N339 61 aa4.93□□□□□ -1.62
TNXB-208ENST00000611016 MT3P25713 68 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms