RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
RPF2-204ENST00000607388 H0YAA0 97 aa3.51□□□□□ -1.85
RPF2-204ENST00000607388 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
RPF2-204ENST00000607388 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
RPF2-204ENST00000607388 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
RPF2-204ENST00000607388 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
RPF2-204ENST00000607388 P0C880 135 aa3.47□□□□□ -1.85
RPF2-204ENST00000607388 KRTAP3-3Q9BYR6 98 aa3.47□□□□□ -1.85
RPF2-204ENST00000607388 KRTAP3-2Q9BYR7 98 aa3.47□□□□□ -1.85
RPF2-204ENST00000607388 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
RPF2-204ENST00000607388 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.85
RPF2-204ENST00000607388 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
RPF2-204ENST00000607388 COX6B2Q6YFQ2 88 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 PKD1P98161 4303 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 RYR1P21817 5038 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 KRTAP3-1Q9BYR8 98 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
RPF2-204ENST00000607388 A8MUU9 505 aa3.44□□□□□ -1.86
RPF2-204ENST00000607388 HERC2O95714 4834 aa3.41□□□□□ -1.86
RPF2-204ENST00000607388 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
RPF2-204ENST00000607388 Q5VSD8 79 aa3.4□□□□□ -1.86
RPF2-204ENST00000607388 ABCA13Q86UQ4 5058 aa3.4□□□□□ -1.86
RPF2-204ENST00000607388 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
RPF2-204ENST00000607388 HSPG2P98160 4391 aa3.39□□□□□ -1.87
RPF2-204ENST00000607388 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
RPF2-204ENST00000607388 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
RPF2-204ENST00000607388 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
RPF2-204ENST00000607388 S4R3F8 94 aa3.38□□□□□ -1.87
RPF2-204ENST00000607388 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
RPF2-204ENST00000607388 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
RPF2-204ENST00000607388 HERC1Q15751 4861 aa3.32□□□□□ -1.88
RPF2-204ENST00000607388 XP32Q5T750 250 aa3.31□□□□□ -1.88
RPF2-204ENST00000607388 LRP2P98164 4655 aa3.3□□□□□ -1.88
RPF2-204ENST00000607388 M0QZ58 72 aa3.3□□□□□ -1.88
RPF2-204ENST00000607388 TPRXLQ17RH7 258 aa3.29□□□□□ -1.88
RPF2-204ENST00000607388 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
RPF2-204ENST00000607388 R4GN34 69 aa3.28□□□□□ -1.88
RPF2-204ENST00000607388 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
RPF2-204ENST00000607388 LPAP08519 4548 aa3.26□□□□□ -1.89
RPF2-204ENST00000607388 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
RPF2-204ENST00000607388 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
RPF2-204ENST00000607388 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
RPF2-204ENST00000607388 MUC2Q02817 5179 aa3.19□□□□□ -1.9
RPF2-204ENST00000607388 PKHD1L1Q86WI1 4243 aa3.19□□□□□ -1.9
RPF2-204ENST00000607388 LCE2BO14633 110 aa3.18□□□□□ -1.9
RPF2-204ENST00000607388 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
RPF2-204ENST00000607388 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
RPF2-204ENST00000607388 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
RPF2-204ENST00000607388 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
RPF2-204ENST00000607388 TNXBP22105 4242 aa3.13□□□□□ -1.91
RPF2-204ENST00000607388 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
RPF2-204ENST00000607388 M0R2T5 61 aa3.1□□□□□ -1.91
RPF2-204ENST00000607388 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.92
RPF2-204ENST00000607388 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
RPF2-204ENST00000607388 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
RPF2-204ENST00000607388 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
RPF2-204ENST00000607388 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
RPF2-204ENST00000607388 KRTAP4-1Q9BYQ7 146 aa3.01□□□□□ -1.93
RPF2-204ENST00000607388 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
RPF2-204ENST00000607388 TNP1P09430 55 aa2.92□□□□□ -1.94
RPF2-204ENST00000607388 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
RPF2-204ENST00000607388 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
RPF2-204ENST00000607388 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
RPF2-204ENST00000607388 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
RPF2-204ENST00000607388 KRTAP10-10P60014 251 aa2.87□□□□□ -1.95
RPF2-204ENST00000607388 INE1O15225 51 aa2.85□□□□□ -1.95
RPF2-204ENST00000607388 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
RPF2-204ENST00000607388 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
RPF2-204ENST00000607388 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
RPF2-204ENST00000607388 MUC17Q685J3 4493 aa2.78□□□□□ -1.97
RPF2-204ENST00000607388 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
RPF2-204ENST00000607388 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
RPF2-204ENST00000607388 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
RPF2-204ENST00000607388 USH2AO75445 5202 aa2.75□□□□□ -1.97
RPF2-204ENST00000607388 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
RPF2-204ENST00000607388 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
RPF2-204ENST00000607388 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
RPF2-204ENST00000607388 KMT2DO14686 5537 aa2.71□□□□□ -1.98
RPF2-204ENST00000607388 MT1HP80294 61 aa2.69□□□□□ -1.98
RPF2-204ENST00000607388 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
RPF2-204ENST00000607388 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
RPF2-204ENST00000607388 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
RPF2-204ENST00000607388 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
RPF2-204ENST00000607388 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
RPF2-204ENST00000607388 MT1FP04733 61 aa2.65□□□□□ -1.98
RPF2-204ENST00000607388 KRTAP19-1Q8IUB9 90 aa2.64□□□□□ -1.99
RPF2-204ENST00000607388 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
RPF2-204ENST00000607388 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
RPF2-204ENST00000607388 MT2AP02795 61 aa2.61□□□□□ -1.99
RPF2-204ENST00000607388 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
RPF2-204ENST00000607388 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
RPF2-204ENST00000607388 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
RPF2-204ENST00000607388 KRTAP12-3P60328 96 aa2.59□□□□□ -2
RPF2-204ENST00000607388 KRTAP10-12P60413 245 aa2.59□□□□□ -2
RPF2-204ENST00000607388 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
RPF2-204ENST00000607388 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
RPF2-204ENST00000607388 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms