RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
SH3D19-211ENST00000604030 KRTAP19-4Q3LI73 84 aa8.33□□□□□ -1.08
SH3D19-211ENST00000604030 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
SH3D19-211ENST00000604030 KRTAP4-1Q9BYQ7 146 aa8.28□□□□□ -1.08
SH3D19-211ENST00000604030 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
SH3D19-211ENST00000604030 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
SH3D19-211ENST00000604030 MT1HP80294 61 aa8.24□□□□□ -1.09
SH3D19-211ENST00000604030 CSMD2Q7Z408 3487 aa8.23□□□□□ -1.09
SH3D19-211ENST00000604030 MT2AP02795 61 aa8.21□□□□□ -1.09
SH3D19-211ENST00000604030 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
SH3D19-211ENST00000604030 SPENQ96T58 3664 aaKnown RBP8.16□□□□□ -1.1
SH3D19-211ENST00000604030 DNAH1Q9P2D7 4330 aa8.11□□□□□ -1.11
SH3D19-211ENST00000604030 PLECQ15149 4684 aaKnown RBP8.09□□□□□ -1.11
SH3D19-211ENST00000604030 DNAH17Q9UFH2 4485 aa8.05□□□□□ -1.12
SH3D19-211ENST00000604030 LCE3CQ5T5A8 94 aa8.03□□□□□ -1.12
SH3D19-211ENST00000604030 MT1FP04733 61 aa7.98□□□□□ -1.13
SH3D19-211ENST00000604030 KRTAP19-5Q3LI72 72 aa7.97□□□□□ -1.13
SH3D19-211ENST00000604030 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
SH3D19-211ENST00000604030 FAT1Q14517 4588 aa7.89□□□□□ -1.15
SH3D19-211ENST00000604030 BSNQ9UPA5 3926 aa7.88□□□□□ -1.15
SH3D19-211ENST00000604030 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.16
SH3D19-211ENST00000604030 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
SH3D19-211ENST00000604030 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
SH3D19-211ENST00000604030 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
SH3D19-211ENST00000604030 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
SH3D19-211ENST00000604030 DYNC2H1Q8NCM8 4307 aaKnown RBP7.69□□□□□ -1.18
SH3D19-211ENST00000604030 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
SH3D19-211ENST00000604030 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
SH3D19-211ENST00000604030 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
SH3D19-211ENST00000604030 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.18
SH3D19-211ENST00000604030 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
SH3D19-211ENST00000604030 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
SH3D19-211ENST00000604030 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.19
SH3D19-211ENST00000604030 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
SH3D19-211ENST00000604030 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
SH3D19-211ENST00000604030 MT1XP80297 61 aa7.48□□□□□ -1.21
SH3D19-211ENST00000604030 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
SH3D19-211ENST00000604030 RYR1P21817 5038 aa7.46□□□□□ -1.22
SH3D19-211ENST00000604030 APOBP04114 4563 aaKnown RBP7.46□□□□□ -1.22
SH3D19-211ENST00000604030 ZNF469Q96JG9 3925 aaPredicted RBP7.44□□□□□ -1.22
SH3D19-211ENST00000604030 STARD9Q9P2P6 4700 aa7.38□□□□□ -1.23
SH3D19-211ENST00000604030 MT1BP07438 61 aa7.37□□□□□ -1.23
SH3D19-211ENST00000604030 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
SH3D19-211ENST00000604030 HERC1Q15751 4861 aa7.3□□□□□ -1.24
SH3D19-211ENST00000604030 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
SH3D19-211ENST00000604030 HSPG2P98160 4391 aa7.26□□□□□ -1.25
SH3D19-211ENST00000604030 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
SH3D19-211ENST00000604030 MT1GP13640 62 aa7.24□□□□□ -1.25
SH3D19-211ENST00000604030 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
SH3D19-211ENST00000604030 DNAH6Q9C0G6 4158 aa7.22□□□□□ -1.25
SH3D19-211ENST00000604030 FAT3Q8TDW7 4589 aa7.22□□□□□ -1.25
SH3D19-211ENST00000604030 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
SH3D19-211ENST00000604030 ANK2Q01484 3957 aa7.16□□□□□ -1.26
SH3D19-211ENST00000604030 RYR3Q15413 4870 aa7.15□□□□□ -1.26
SH3D19-211ENST00000604030 SPRR2EP22531 72 aa7.15□□□□□ -1.26
SH3D19-211ENST00000604030 SPRR2BP35325 72 aa7.15□□□□□ -1.26
SH3D19-211ENST00000604030 SPRR2AP35326 72 aa7.15□□□□□ -1.26
SH3D19-211ENST00000604030 RYR2Q92736 4967 aa7.13□□□□□ -1.27
SH3D19-211ENST00000604030 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
SH3D19-211ENST00000604030 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
SH3D19-211ENST00000604030 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
SH3D19-211ENST00000604030 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
SH3D19-211ENST00000604030 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
SH3D19-211ENST00000604030 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
SH3D19-211ENST00000604030 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
SH3D19-211ENST00000604030 LCE3DQ9BYE3 92 aa7.05□□□□□ -1.28
SH3D19-211ENST00000604030 LCE2BO14633 110 aa7.01□□□□□ -1.29
SH3D19-211ENST00000604030 LCE3EQ5T5B0 92 aa7□□□□□ -1.29
SH3D19-211ENST00000604030 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
SH3D19-211ENST00000604030 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
SH3D19-211ENST00000604030 SPRR2DP22532 72 aa6.94□□□□□ -1.3
SH3D19-211ENST00000604030 MT1LQ93083 61 aa6.94□□□□□ -1.3
SH3D19-211ENST00000604030 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
SH3D19-211ENST00000604030 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
SH3D19-211ENST00000604030 PKD1P98161 4303 aa6.86□□□□□ -1.31
SH3D19-211ENST00000604030 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
SH3D19-211ENST00000604030 MT1EP04732 61 aa6.78□□□□□ -1.32
SH3D19-211ENST00000604030 FRAS1Q86XX4 4008 aa6.78□□□□□ -1.32
SH3D19-211ENST00000604030 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
SH3D19-211ENST00000604030 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
SH3D19-211ENST00000604030 LYSTQ99698 3801 aa6.65□□□□□ -1.34
SH3D19-211ENST00000604030 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
SH3D19-211ENST00000604030 MT1MQ8N339 61 aa6.55□□□□□ -1.36
SH3D19-211ENST00000604030 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
SH3D19-211ENST00000604030 MT3P25713 68 aa6.53□□□□□ -1.36
SH3D19-211ENST00000604030 HERC2O95714 4834 aa6.53□□□□□ -1.36
SH3D19-211ENST00000604030 LRP2P98164 4655 aa6.48□□□□□ -1.37
SH3D19-211ENST00000604030 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
SH3D19-211ENST00000604030 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
SH3D19-211ENST00000604030 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
SH3D19-211ENST00000604030 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
SH3D19-211ENST00000604030 PRM1P04553 51 aa6.37□□□□□ -1.39
SH3D19-211ENST00000604030 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
SH3D19-211ENST00000604030 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
SH3D19-211ENST00000604030 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
SH3D19-211ENST00000604030 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
SH3D19-211ENST00000604030 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
SH3D19-211ENST00000604030 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
SH3D19-211ENST00000604030 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
SH3D19-211ENST00000604030 MT1AP04731 61 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms