RNA–Protein interactions for RNA: ENST00000601762.5

FARP1-236, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-236ENST00000601762 FRYLO94915 3013 aa0.54□□□□□ -2.32
FARP1-236ENST00000601762 COL12A1Q99715 3063 aa0.54□□□□□ -2.32
FARP1-236ENST00000601762 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
FARP1-236ENST00000601762 CEP290O15078 2479 aa0.54□□□□□ -2.32
FARP1-236ENST00000601762 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
FARP1-236ENST00000601762 TLN1Q9Y490 2541 aaKnown RBP0.54□□□□□ -2.32
FARP1-236ENST00000601762 ACACBO00763 2458 aa0.53□□□□□ -2.32
FARP1-236ENST00000601762 TGP01266 2768 aa0.53□□□□□ -2.32
FARP1-236ENST00000601762 TENM2Q9NT68 2774 aa0.53□□□□□ -2.32
FARP1-236ENST00000601762 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
FARP1-236ENST00000601762 CUBNO60494 3623 aa0.53□□□□□ -2.32
FARP1-236ENST00000601762 LAMA5O15230 3695 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 UTP20O75691 2785 aaKnown RBP0.52□□□□□ -2.33
FARP1-236ENST00000601762 MGAQ8IWI9 3026 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 HMCN2Q8NDA2 5059 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 TNXBP22105 4242 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 CSMD2Q7Z408 3487 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 RPL39LQ96EH5 51 aaKnown RBP0.52□□□□□ -2.33
FARP1-236ENST00000601762 ARHGAP5-AS1Q96IT6 56 aa0.52□□□□□ -2.33
FARP1-236ENST00000601762 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
FARP1-236ENST00000601762 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
FARP1-236ENST00000601762 SSPOA2VEC9 5147 aa0.51□□□□□ -2.33
FARP1-236ENST00000601762 TRIOO75962 3097 aa0.51□□□□□ -2.33
FARP1-236ENST00000601762 PRM1P04553 51 aa0.51□□□□□ -2.33
FARP1-236ENST00000601762 LRBAP50851 2863 aa0.51□□□□□ -2.33
FARP1-236ENST00000601762 FAT3Q8TDW7 4589 aa0.51□□□□□ -2.33
FARP1-236ENST00000601762 SPTAN1Q13813 2472 aaKnown RBP0.5□□□□□ -2.33
FARP1-236ENST00000601762 CHD7Q9P2D1 2997 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
FARP1-236ENST00000601762 NCOR1O75376 2440 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 ATMQ13315 3056 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 VPS13CQ709C8 3753 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 TENM3Q9P273 2699 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
FARP1-236ENST00000601762 DNAH1Q9P2D7 4330 aa0.5□□□□□ -2.33
FARP1-236ENST00000601762 USP9YO00507 2555 aaPredicted RBP0.5□□□□□ -2.33
FARP1-236ENST00000601762 MACF1Q9UPN3 7388 aaKnown RBP0.49□□□□□ -2.33
FARP1-236ENST00000601762 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 CEP295Q9C0D2 2601 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 RNF213Q63HN8 5207 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 CREBBPQ92793 2442 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 KMT2AQ03164 3969 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 SVEP1Q4LDE5 3571 aa0.49□□□□□ -2.33
FARP1-236ENST00000601762 PKD1P98161 4303 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 DMXL2Q8TDJ6 3036 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 TNP1P09430 55 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 PLECQ15149 4684 aaKnown RBP0.48□□□□□ -2.33
FARP1-236ENST00000601762 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 KRTAP5-10Q6L8G5 202 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 DYNC1H1Q14204 4646 aaKnown RBP0.48□□□□□ -2.33
FARP1-236ENST00000601762 AKAP9Q99996 3911 aa0.48□□□□□ -2.33
FARP1-236ENST00000601762 ADGRG4Q8IZF6 3080 aa0.47□□□□□ -2.33
FARP1-236ENST00000601762 SPRR2DP22532 72 aa0.47□□□□□ -2.33
FARP1-236ENST00000601762 MTORP42345 2549 aa0.47□□□□□ -2.33
FARP1-236ENST00000601762 ITPR2Q14571 2701 aa0.47□□□□□ -2.33
FARP1-236ENST00000601762 HUWE1Q7Z6Z7 4374 aaKnown RBP0.47□□□□□ -2.33
FARP1-236ENST00000601762 FAT1Q14517 4588 aa0.47□□□□□ -2.33
FARP1-236ENST00000601762 LAMA1P25391 3075 aa0.46□□□□□ -2.34
FARP1-236ENST00000601762 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
FARP1-236ENST00000601762 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
FARP1-236ENST00000601762 HIVEP3Q5T1R4 2406 aa0.46□□□□□ -2.34
FARP1-236ENST00000601762 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
FARP1-236ENST00000601762 APOBP04114 4563 aaKnown RBP0.45□□□□□ -2.34
FARP1-236ENST00000601762 STARD9Q9P2P6 4700 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 KMT2DO14686 5537 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 DNAH9Q9NYC9 4486 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 SPRR2BP35325 72 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 LINC01590Q5TEZ4 76 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 LEAP2Q969E1 77 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 TOMM7Q9P0U1 55 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
FARP1-236ENST00000601762 DCHS2Q6V1P9 2916 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 LRP2P98164 4655 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 ACANP16112 2415 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 TACC2O95359 2948 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 H3BNG1 76 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
FARP1-236ENST00000601762 NBASA2RRP1 2371 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 ANK3Q12955 4377 aaKnown RBP0.43□□□□□ -2.34
FARP1-236ENST00000601762 COL7A1Q02388 2944 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 HSPG2P98160 4391 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 CENPEQ02224 2701 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 PRCDQ00LT1 54 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 USH2AO75445 5202 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 LYSTQ99698 3801 aa0.43□□□□□ -2.34
FARP1-236ENST00000601762 MAP1AP78559 2803 aaPredicted RBP0.42□□□□□ -2.34
FARP1-236ENST00000601762 MGAM2Q2M2H8 2515 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 WNK1Q9H4A3 2382 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 DNAH7Q8WXX0 4024 aa0.42□□□□□ -2.34
FARP1-236ENST00000601762 RIF1Q5UIP0 2472 aaKnown RBP0.42□□□□□ -2.34
FARP1-236ENST00000601762 MUC16Q8WXI7 14507 aa0.41□□□□□ -2.34
FARP1-236ENST00000601762 DNAH11Q96DT5 4516 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms