RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
SHKBP1-224ENST00000600718 SPINK7P58062 85 aa9.33□□□□□ -0.92
SHKBP1-224ENST00000600718 PCLOQ9Y6V0 5065 aa9.26□□□□□ -0.93
SHKBP1-224ENST00000600718 ACYP2P14621 99 aa9.26□□□□□ -0.93
SHKBP1-224ENST00000600718 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.93
SHKBP1-224ENST00000600718 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
SHKBP1-224ENST00000600718 LPAP08519 4548 aa9.18□□□□□ -0.94
SHKBP1-224ENST00000600718 LRP2P98164 4655 aa9.12□□□□□ -0.95
SHKBP1-224ENST00000600718 A0A1B0GU69 56 aa9.08□□□□□ -0.96
SHKBP1-224ENST00000600718 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
SHKBP1-224ENST00000600718 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
SHKBP1-224ENST00000600718 KRTAP3-1Q9BYR8 98 aa9.04□□□□□ -0.96
SHKBP1-224ENST00000600718 HERC1Q15751 4861 aa9.02□□□□□ -0.96
SHKBP1-224ENST00000600718 UQCR11O14957 56 aa8.99□□□□□ -0.97
SHKBP1-224ENST00000600718 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
SHKBP1-224ENST00000600718 H3BS24 57 aa8.97□□□□□ -0.97
SHKBP1-224ENST00000600718 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
SHKBP1-224ENST00000600718 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
SHKBP1-224ENST00000600718 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.97
SHKBP1-224ENST00000600718 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
SHKBP1-224ENST00000600718 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
SHKBP1-224ENST00000600718 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.98
SHKBP1-224ENST00000600718 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
SHKBP1-224ENST00000600718 S4R3F8 94 aa8.79□□□□□ -1
SHKBP1-224ENST00000600718 KRTAP19-2Q3LHN2 52 aa8.73□□□□□ -1.01
SHKBP1-224ENST00000600718 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
SHKBP1-224ENST00000600718 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
SHKBP1-224ENST00000600718 H0YAA0 97 aa8.57□□□□□ -1.04
SHKBP1-224ENST00000600718 MUC2Q02817 5179 aa8.55□□□□□ -1.04
SHKBP1-224ENST00000600718 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
SHKBP1-224ENST00000600718 A0A1B0GU33 70 aa8.51□□□□□ -1.05
SHKBP1-224ENST00000600718 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
SHKBP1-224ENST00000600718 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
SHKBP1-224ENST00000600718 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
SHKBP1-224ENST00000600718 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
SHKBP1-224ENST00000600718 ROMO1P60602 79 aa8.41□□□□□ -1.06
SHKBP1-224ENST00000600718 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
SHKBP1-224ENST00000600718 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
SHKBP1-224ENST00000600718 MT1HP80294 61 aa8.37□□□□□ -1.07
SHKBP1-224ENST00000600718 K7ERS5 55 aa8.35□□□□□ -1.07
SHKBP1-224ENST00000600718 P0C880 135 aa8.33□□□□□ -1.08
SHKBP1-224ENST00000600718 M0R2T5 61 aa8.3□□□□□ -1.08
SHKBP1-224ENST00000600718 FAT4Q6V0I7 4981 aa8.21□□□□□ -1.1
SHKBP1-224ENST00000600718 M0QZ58 72 aa8.16□□□□□ -1.1
SHKBP1-224ENST00000600718 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.11
SHKBP1-224ENST00000600718 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
SHKBP1-224ENST00000600718 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
SHKBP1-224ENST00000600718 R4GN34 69 aa8.1□□□□□ -1.11
SHKBP1-224ENST00000600718 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
SHKBP1-224ENST00000600718 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
SHKBP1-224ENST00000600718 MT2AP02795 61 aa8.03□□□□□ -1.12
SHKBP1-224ENST00000600718 A0A0D9SG42 100 aa8.01□□□□□ -1.13
SHKBP1-224ENST00000600718 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
SHKBP1-224ENST00000600718 MT1FP04733 61 aa7.98□□□□□ -1.13
SHKBP1-224ENST00000600718 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
SHKBP1-224ENST00000600718 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
SHKBP1-224ENST00000600718 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
SHKBP1-224ENST00000600718 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
SHKBP1-224ENST00000600718 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SHKBP1-224ENST00000600718 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
SHKBP1-224ENST00000600718 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
SHKBP1-224ENST00000600718 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
SHKBP1-224ENST00000600718 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
SHKBP1-224ENST00000600718 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
SHKBP1-224ENST00000600718 A0A0A0MQY5 61 aa7.68□□□□□ -1.18
SHKBP1-224ENST00000600718 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
SHKBP1-224ENST00000600718 CAMK2N1Q7Z7J9 78 aa7.59□□□□□ -1.2
SHKBP1-224ENST00000600718 MT1BP07438 61 aa7.56□□□□□ -1.2
SHKBP1-224ENST00000600718 LCE2BO14633 110 aa7.55□□□□□ -1.2
SHKBP1-224ENST00000600718 LUZP6Q538Z0 58 aa7.36□□□□□ -1.23
SHKBP1-224ENST00000600718 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
SHKBP1-224ENST00000600718 MT1XP80297 61 aa7.31□□□□□ -1.24
SHKBP1-224ENST00000600718 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
SHKBP1-224ENST00000600718 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
SHKBP1-224ENST00000600718 TNP1P09430 55 aa7.23□□□□□ -1.25
SHKBP1-224ENST00000600718 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
SHKBP1-224ENST00000600718 USH2AO75445 5202 aa7.19□□□□□ -1.26
SHKBP1-224ENST00000600718 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
SHKBP1-224ENST00000600718 KRTAP19-6Q3LI70 58 aa7.11□□□□□ -1.27
SHKBP1-224ENST00000600718 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
SHKBP1-224ENST00000600718 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
SHKBP1-224ENST00000600718 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
SHKBP1-224ENST00000600718 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
SHKBP1-224ENST00000600718 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
SHKBP1-224ENST00000600718 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
SHKBP1-224ENST00000600718 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
SHKBP1-224ENST00000600718 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
SHKBP1-224ENST00000600718 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
SHKBP1-224ENST00000600718 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
SHKBP1-224ENST00000600718 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
SHKBP1-224ENST00000600718 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
SHKBP1-224ENST00000600718 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
SHKBP1-224ENST00000600718 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
SHKBP1-224ENST00000600718 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
SHKBP1-224ENST00000600718 KMT2DO14686 5537 aa6.53□□□□□ -1.36
SHKBP1-224ENST00000600718 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
SHKBP1-224ENST00000600718 MT1EP04732 61 aa6.41□□□□□ -1.38
SHKBP1-224ENST00000600718 INE1O15225 51 aa6.38□□□□□ -1.39
SHKBP1-224ENST00000600718 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
SHKBP1-224ENST00000600718 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms