RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 A8MUN3 132 aa12.9□□□□□ -0.34
SSBP4-206ENST00000599699 H3BPC8 53 aa12.88□□□□□ -0.35
SSBP4-206ENST00000599699 MT-ATP8P03928 68 aa12.87□□□□□ -0.35
SSBP4-206ENST00000599699 IMUPQ9GZP8 106 aa12.87□□□□□ -0.35
SSBP4-206ENST00000599699 NDUFC1O43677 76 aa12.86□□□□□ -0.35
SSBP4-206ENST00000599699 FCGBPQ9Y6R7 5405 aaPredicted RBP12.84□□□□□ -0.35
SSBP4-206ENST00000599699 KRTAP19-6Q3LI70 58 aa12.79□□□□□ -0.36
SSBP4-206ENST00000599699 KRTAP9-7A8MTY7 169 aa12.78□□□□□ -0.36
SSBP4-206ENST00000599699 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.78□□□□□ -0.36
SSBP4-206ENST00000599699 SMIM20Q8N5G0 67 aa12.68□□□□□ -0.38
SSBP4-206ENST00000599699 SPRR2GQ9BYE4 73 aa12.68□□□□□ -0.38
SSBP4-206ENST00000599699 TRAV7A0A075B6U4 112 aa12.65□□□□□ -0.38
SSBP4-206ENST00000599699 H0YAA0 97 aa12.61□□□□□ -0.39
SSBP4-206ENST00000599699 Q5VV11 94 aa12.61□□□□□ -0.39
SSBP4-206ENST00000599699 DMAC1Q96GE9 116 aa12.61□□□□□ -0.39
SSBP4-206ENST00000599699 CRIPTQ9P021 101 aa12.6□□□□□ -0.39
SSBP4-206ENST00000599699 KRTAP19-8Q3LI54 63 aa12.56□□□□□ -0.4
SSBP4-206ENST00000599699 ADM2Q7Z4H4 148 aa12.55□□□□□ -0.4
SSBP4-206ENST00000599699 MT1BP07438 61 aa12.53□□□□□ -0.4
SSBP4-206ENST00000599699 ACYP2P14621 99 aa12.39□□□□□ -0.43
SSBP4-206ENST00000599699 SNURFQ9Y675 71 aa12.39□□□□□ -0.43
SSBP4-206ENST00000599699 MACF1Q9UPN3 7388 aaKnown RBP12.38□□□□□ -0.43
SSBP4-206ENST00000599699 A6NN06 94 aa12.37□□□□□ -0.43
SSBP4-206ENST00000599699 SERP2Q8N6R1 65 aa12.31□□□□□ -0.44
SSBP4-206ENST00000599699 C20orf197Q8N268 126 aa12.3□□□□□ -0.44
SSBP4-206ENST00000599699 P0C880 135 aa12.26□□□□□ -0.45
SSBP4-206ENST00000599699 SPTSSBQ8NFR3 76 aa12.23□□□□□ -0.45
SSBP4-206ENST00000599699 CHKB-CPT1BH3BT56 60 aa12.22□□□□□ -0.45
SSBP4-206ENST00000599699 R4GN34 69 aa12.22□□□□□ -0.45
SSBP4-206ENST00000599699 KRTAP10-5P60370 271 aa12.21□□□□□ -0.45
SSBP4-206ENST00000599699 SYNE2Q8WXH0 6885 aaKnown RBP12.21□□□□□ -0.46
SSBP4-206ENST00000599699 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SSBP4-206ENST00000599699 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
SSBP4-206ENST00000599699 M0QZ58 72 aa12.14□□□□□ -0.47
SSBP4-206ENST00000599699 PLAC4Q8WY50 150 aa12.05□□□□□ -0.48
SSBP4-206ENST00000599699 KRTAP6-3Q3LI67 103 aa12□□□□□ -0.49
SSBP4-206ENST00000599699 LINC01554Q52M75 96 aa11.99□□□□□ -0.49
SSBP4-206ENST00000599699 COX7CP15954 63 aa11.98□□□□□ -0.49
SSBP4-206ENST00000599699 PRO2289Q9P1D8 64 aa11.91□□□□□ -0.5
SSBP4-206ENST00000599699 COA5Q86WW8 74 aa11.83□□□□□ -0.52
SSBP4-206ENST00000599699 MT1XP80297 61 aa11.82□□□□□ -0.52
SSBP4-206ENST00000599699 H7BZZ5 65 aa11.74□□□□□ -0.53
SSBP4-206ENST00000599699 CYSTM1Q9H1C7 97 aa11.74□□□□□ -0.53
SSBP4-206ENST00000599699 ANAPC13Q9BS18 74 aa11.72□□□□□ -0.53
SSBP4-206ENST00000599699 SEC61GP60059 68 aa11.59□□□□□ -0.55
SSBP4-206ENST00000599699 SERP1Q9Y6X1 66 aa11.56□□□□□ -0.56
SSBP4-206ENST00000599699 KRTAP13-4Q3LI77 160 aa11.54□□□□□ -0.56
SSBP4-206ENST00000599699 KRTAP5-9P26371 169 aa11.52□□□□□ -0.57
SSBP4-206ENST00000599699 NEBP20929 6669 aa11.48□□□□□ -0.57
SSBP4-206ENST00000599699 MUC12Q9UKN1 5478 aa11.47□□□□□ -0.57
SSBP4-206ENST00000599699 KRTAP12-2P59991 146 aa11.47□□□□□ -0.57
SSBP4-206ENST00000599699 CCDC179H3BU77 68 aa11.46□□□□□ -0.57
SSBP4-206ENST00000599699 KMT2DO14686 5537 aa11.44□□□□□ -0.58
SSBP4-206ENST00000599699 KRTAP8-1Q8IUC2 63 aa11.37□□□□□ -0.59
SSBP4-206ENST00000599699 A0A1B0GU33 70 aa11.33□□□□□ -0.6
SSBP4-206ENST00000599699 SPRR2FQ96RM1 72 aa11.32□□□□□ -0.6
SSBP4-206ENST00000599699 CAMK2N1Q7Z7J9 78 aa11.31□□□□□ -0.6
SSBP4-206ENST00000599699 A0A0D9SG42 100 aa11.3□□□□□ -0.6
SSBP4-206ENST00000599699 KRTAP10-7P60409 375 aaPredicted RBP11.3□□□□□ -0.6
SSBP4-206ENST00000599699 SPATA8Q6RVD6 105 aa11.29□□□□□ -0.6
SSBP4-206ENST00000599699 A0A1B0GU69 56 aa11.25□□□□□ -0.61
SSBP4-206ENST00000599699 ATP5EP56381 51 aaPredicted RBP11.25□□□□□ -0.61
SSBP4-206ENST00000599699 MDN1Q9NU22 5596 aa11.24□□□□□ -0.61
SSBP4-206ENST00000599699 KRTAP4-8A0A0G2JLE6 195 aa11.24□□□□□ -0.61
SSBP4-206ENST00000599699 KRTAP4-8Q9BYQ9 185 aa11.24□□□□□ -0.61
SSBP4-206ENST00000599699 KRTAP10-12P60413 245 aa11.22□□□□□ -0.61
SSBP4-206ENST00000599699 KRTAP20-1Q3LI63 56 aa11.14□□□□□ -0.63
SSBP4-206ENST00000599699 SPINT4Q6UDR6 99 aa11.13□□□□□ -0.63
SSBP4-206ENST00000599699 SPRR2EP22531 72 aa11.1□□□□□ -0.63
SSBP4-206ENST00000599699 SPRR2BP35325 72 aa11.1□□□□□ -0.63
SSBP4-206ENST00000599699 SPRR2AP35326 72 aa11.1□□□□□ -0.63
SSBP4-206ENST00000599699 TMEM258P61165 79 aa11.03□□□□□ -0.64
SSBP4-206ENST00000599699 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
SSBP4-206ENST00000599699 KRTAP12-1P59990 96 aa11.01□□□□□ -0.65
SSBP4-206ENST00000599699 PRR15LQ9BU68 103 aa11□□□□□ -0.65
SSBP4-206ENST00000599699 LCE1AQ5T7P2 110 aa10.93□□□□□ -0.66
SSBP4-206ENST00000599699 A8MU10 97 aa10.91□□□□□ -0.66
SSBP4-206ENST00000599699 LINC01558Q9Y6Z2 57 aa10.89□□□□□ -0.67
SSBP4-206ENST00000599699 KRTAP2-3P0C7H8 128 aa10.8□□□□□ -0.68
SSBP4-206ENST00000599699 KRTAP2-4Q9BYR9 128 aa10.8□□□□□ -0.68
SSBP4-206ENST00000599699 SPRR2DP22532 72 aa10.73□□□□□ -0.69
SSBP4-206ENST00000599699 UQCR11O14957 56 aa10.61□□□□□ -0.71
SSBP4-206ENST00000599699 KRTAP19-7Q3SYF9 63 aa10.55□□□□□ -0.72
SSBP4-206ENST00000599699 C10orf95Q9H7T3 257 aa10.5□□□□□ -0.73
SSBP4-206ENST00000599699 MT1EP04732 61 aa10.46□□□□□ -0.73
SSBP4-206ENST00000599699 TNP1P09430 55 aa10.46□□□□□ -0.73
SSBP4-206ENST00000599699 KRTAP2-2Q9BYT5 123 aa10.46□□□□□ -0.73
SSBP4-206ENST00000599699 KRTAP2-1Q9BYU5 128 aa10.46□□□□□ -0.73
SSBP4-206ENST00000599699 V9GYY9 64 aa10.42□□□□□ -0.74
SSBP4-206ENST00000599699 MIR22HGQ0VDD5 57 aa10.4□□□□□ -0.74
SSBP4-206ENST00000599699 KRTAP19-5Q3LI72 72 aa10.4□□□□□ -0.74
SSBP4-206ENST00000599699 LCE3BQ5TA77 95 aa10.4□□□□□ -0.74
SSBP4-206ENST00000599699 PSPHP1O15172 72 aa10.36□□□□□ -0.75
SSBP4-206ENST00000599699 KRTAP19-3Q7Z4W3 81 aa10.33□□□□□ -0.76
SSBP4-206ENST00000599699 Q1T7F1 81 aa10.32□□□□□ -0.76
SSBP4-206ENST00000599699 PCP4P48539 62 aa10.3□□□□□ -0.76
SSBP4-206ENST00000599699 LCE5AQ5TCM9 118 aa10.3□□□□□ -0.76
SSBP4-206ENST00000599699 LCE3AQ5TA76 89 aa10.29□□□□□ -0.76
SSBP4-206ENST00000599699 K7ERS5 55 aa10.21□□□□□ -0.77
SSBP4-206ENST00000599699 MT1GP13640 62 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms