RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
SYMPK-213ENST00000599460 DNAH10Q8IVF4 4471 aa6.91□□□□□ -1.3
SYMPK-213ENST00000599460 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
SYMPK-213ENST00000599460 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
SYMPK-213ENST00000599460 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
SYMPK-213ENST00000599460 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
SYMPK-213ENST00000599460 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
SYMPK-213ENST00000599460 DNAH3Q8TD57 4116 aa6.82□□□□□ -1.32
SYMPK-213ENST00000599460 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
SYMPK-213ENST00000599460 CMYA5Q8N3K9 4069 aa6.79□□□□□ -1.32
SYMPK-213ENST00000599460 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
SYMPK-213ENST00000599460 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
SYMPK-213ENST00000599460 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
SYMPK-213ENST00000599460 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
SYMPK-213ENST00000599460 KMT2AQ03164 3969 aa6.68□□□□□ -1.34
SYMPK-213ENST00000599460 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
SYMPK-213ENST00000599460 FAT1Q14517 4588 aa6.64□□□□□ -1.35
SYMPK-213ENST00000599460 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
SYMPK-213ENST00000599460 SACSQ9NZJ4 4579 aa6.57□□□□□ -1.36
SYMPK-213ENST00000599460 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
SYMPK-213ENST00000599460 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
SYMPK-213ENST00000599460 RYR1P21817 5038 aa6.52□□□□□ -1.37
SYMPK-213ENST00000599460 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
SYMPK-213ENST00000599460 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
SYMPK-213ENST00000599460 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
SYMPK-213ENST00000599460 LYSTQ99698 3801 aa6.43□□□□□ -1.38
SYMPK-213ENST00000599460 DNAH7Q8WXX0 4024 aa6.42□□□□□ -1.38
SYMPK-213ENST00000599460 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
SYMPK-213ENST00000599460 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
SYMPK-213ENST00000599460 INE1O15225 51 aa6.36□□□□□ -1.39
SYMPK-213ENST00000599460 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
SYMPK-213ENST00000599460 MT1HP80294 61 aa6.34□□□□□ -1.39
SYMPK-213ENST00000599460 RYR3Q15413 4870 aa6.34□□□□□ -1.39
SYMPK-213ENST00000599460 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
SYMPK-213ENST00000599460 RYR2Q92736 4967 aa6.32□□□□□ -1.4
SYMPK-213ENST00000599460 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
SYMPK-213ENST00000599460 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
SYMPK-213ENST00000599460 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
SYMPK-213ENST00000599460 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
SYMPK-213ENST00000599460 MT2AP02795 61 aa6.18□□□□□ -1.42
SYMPK-213ENST00000599460 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
SYMPK-213ENST00000599460 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
SYMPK-213ENST00000599460 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
SYMPK-213ENST00000599460 HSPG2P98160 4391 aa6.12□□□□□ -1.43
SYMPK-213ENST00000599460 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
SYMPK-213ENST00000599460 FAT3Q8TDW7 4589 aa6.09□□□□□ -1.43
SYMPK-213ENST00000599460 MT1FP04733 61 aa6.08□□□□□ -1.44
SYMPK-213ENST00000599460 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
SYMPK-213ENST00000599460 PKHD1P08F94 4074 aa6.06□□□□□ -1.44
SYMPK-213ENST00000599460 BIRC6Q9NR09 4857 aa6.05□□□□□ -1.44
SYMPK-213ENST00000599460 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
SYMPK-213ENST00000599460 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
SYMPK-213ENST00000599460 PKD1P98161 4303 aa6.02□□□□□ -1.45
SYMPK-213ENST00000599460 HERC2O95714 4834 aa6.01□□□□□ -1.45
SYMPK-213ENST00000599460 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
SYMPK-213ENST00000599460 LRP2P98164 4655 aa5.79□□□□□ -1.48
SYMPK-213ENST00000599460 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
SYMPK-213ENST00000599460 TNXBP22105 4242 aa5.77□□□□□ -1.49
SYMPK-213ENST00000599460 LPAP08519 4548 aa5.76□□□□□ -1.49
SYMPK-213ENST00000599460 HERC1Q15751 4861 aa5.76□□□□□ -1.49
SYMPK-213ENST00000599460 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
SYMPK-213ENST00000599460 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
SYMPK-213ENST00000599460 EPPK1P58107 5090 aaKnown RBP5.71□□□□□ -1.5
SYMPK-213ENST00000599460 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
SYMPK-213ENST00000599460 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
SYMPK-213ENST00000599460 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
SYMPK-213ENST00000599460 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
SYMPK-213ENST00000599460 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
SYMPK-213ENST00000599460 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
SYMPK-213ENST00000599460 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
SYMPK-213ENST00000599460 MT1BP07438 61 aa5.57□□□□□ -1.52
SYMPK-213ENST00000599460 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
SYMPK-213ENST00000599460 MT1XP80297 61 aa5.55□□□□□ -1.52
SYMPK-213ENST00000599460 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
SYMPK-213ENST00000599460 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
SYMPK-213ENST00000599460 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
SYMPK-213ENST00000599460 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
SYMPK-213ENST00000599460 SPRR2EP22531 72 aa5.45□□□□□ -1.54
SYMPK-213ENST00000599460 SPRR2BP35325 72 aa5.45□□□□□ -1.54
SYMPK-213ENST00000599460 SPRR2AP35326 72 aa5.45□□□□□ -1.54
SYMPK-213ENST00000599460 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
SYMPK-213ENST00000599460 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SYMPK-213ENST00000599460 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
SYMPK-213ENST00000599460 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
SYMPK-213ENST00000599460 LCE2BO14633 110 aa5.32□□□□□ -1.56
SYMPK-213ENST00000599460 SPRR2DP22532 72 aa5.3□□□□□ -1.56
SYMPK-213ENST00000599460 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
SYMPK-213ENST00000599460 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
SYMPK-213ENST00000599460 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
SYMPK-213ENST00000599460 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
SYMPK-213ENST00000599460 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
SYMPK-213ENST00000599460 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
SYMPK-213ENST00000599460 MT1GP13640 62 aa5.12□□□□□ -1.59
SYMPK-213ENST00000599460 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
SYMPK-213ENST00000599460 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
SYMPK-213ENST00000599460 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
SYMPK-213ENST00000599460 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
SYMPK-213ENST00000599460 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
SYMPK-213ENST00000599460 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
SYMPK-213ENST00000599460 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms