RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SEC61GP60059 68 aa11.86□□□□□ -0.51
SRRM1-222ENST00000596378 RPL37P61927 97 aaKnown RBP11.85□□□□□ -0.51
SRRM1-222ENST00000596378 KTN1-AS1Q86SY8 53 aa11.85□□□□□ -0.51
SRRM1-222ENST00000596378 LPAP08519 4548 aa11.66□□□□□ -0.54
SRRM1-222ENST00000596378 H0YAA0 97 aa11.65□□□□□ -0.54
SRRM1-222ENST00000596378 ABCA13Q86UQ4 5058 aa11.62□□□□□ -0.55
SRRM1-222ENST00000596378 A0A1B0GU33 70 aa11.61□□□□□ -0.55
SRRM1-222ENST00000596378 LRP2P98164 4655 aa11.61□□□□□ -0.55
SRRM1-222ENST00000596378 H1FX-AS1Q4G0G2 97 aa11.59□□□□□ -0.55
SRRM1-222ENST00000596378 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
SRRM1-222ENST00000596378 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
SRRM1-222ENST00000596378 ADM2Q7Z4H4 148 aa11.54□□□□□ -0.56
SRRM1-222ENST00000596378 PRAC1Q96KF2 57 aa11.52□□□□□ -0.57
SRRM1-222ENST00000596378 RBM12B-AS1Q9P1G2 102 aa11.49□□□□□ -0.57
SRRM1-222ENST00000596378 S4R3F8 94 aa11.48□□□□□ -0.57
SRRM1-222ENST00000596378 TPRXLQ17RH7 258 aa11.46□□□□□ -0.57
SRRM1-222ENST00000596378 KRTAP10-6P60371 365 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-222ENST00000596378 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
SRRM1-222ENST00000596378 KRTAP13-4Q3LI77 160 aa11.29□□□□□ -0.6
SRRM1-222ENST00000596378 P0C880 135 aa11.25□□□□□ -0.61
SRRM1-222ENST00000596378 HERC2O95714 4834 aa11.2□□□□□ -0.62
SRRM1-222ENST00000596378 A0A0D9SG42 100 aa11.18□□□□□ -0.62
SRRM1-222ENST00000596378 CSAG1Q6PB30 78 aa11.17□□□□□ -0.62
SRRM1-222ENST00000596378 J3QL48 77 aa11.11□□□□□ -0.63
SRRM1-222ENST00000596378 K7ERS5 55 aa11.1□□□□□ -0.63
SRRM1-222ENST00000596378 MUC17Q685J3 4493 aa11.1□□□□□ -0.63
SRRM1-222ENST00000596378 SEC61BP60468 96 aaKnown RBP11.02□□□□□ -0.64
SRRM1-222ENST00000596378 KRTAP4-1Q9BYQ7 146 aa11.01□□□□□ -0.65
SRRM1-222ENST00000596378 BIRC6Q9NR09 4857 aa10.97□□□□□ -0.65
SRRM1-222ENST00000596378 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
SRRM1-222ENST00000596378 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
SRRM1-222ENST00000596378 KRTAP12-2P59991 146 aa10.88□□□□□ -0.67
SRRM1-222ENST00000596378 KRTAP25-1Q3LHN0 102 aa10.87□□□□□ -0.67
SRRM1-222ENST00000596378 ROMO1P60602 79 aa10.86□□□□□ -0.67
SRRM1-222ENST00000596378 MUC2Q02817 5179 aa10.82□□□□□ -0.68
SRRM1-222ENST00000596378 KRTAP12-1P59990 96 aa10.8□□□□□ -0.68
SRRM1-222ENST00000596378 SPINT4Q6UDR6 99 aa10.8□□□□□ -0.68
SRRM1-222ENST00000596378 M0QZ58 72 aa10.78□□□□□ -0.68
SRRM1-222ENST00000596378 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
SRRM1-222ENST00000596378 KRTAP19-2Q3LHN2 52 aa10.74□□□□□ -0.69
SRRM1-222ENST00000596378 HERC1Q15751 4861 aa10.73□□□□□ -0.69
SRRM1-222ENST00000596378 LORP23490 312 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-222ENST00000596378 R4GN34 69 aa10.64□□□□□ -0.71
SRRM1-222ENST00000596378 HMCN2Q8NDA2 5059 aa10.59□□□□□ -0.71
SRRM1-222ENST00000596378 C10orf95Q9H7T3 257 aa10.57□□□□□ -0.72
SRRM1-222ENST00000596378 FLGP20930 4061 aaPredicted RBP10.51□□□□□ -0.73
SRRM1-222ENST00000596378 FAT4Q6V0I7 4981 aa10.31□□□□□ -0.76
SRRM1-222ENST00000596378 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
SRRM1-222ENST00000596378 UBR4Q5T4S7 5183 aa10.18□□□□□ -0.78
SRRM1-222ENST00000596378 RNF213Q63HN8 5207 aa10.17□□□□□ -0.78
SRRM1-222ENST00000596378 CAMK2N1Q7Z7J9 78 aa10.07□□□□□ -0.8
SRRM1-222ENST00000596378 M0R2T5 61 aa9.95□□□□□ -0.82
SRRM1-222ENST00000596378 MT1HP80294 61 aa9.94□□□□□ -0.82
SRRM1-222ENST00000596378 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
SRRM1-222ENST00000596378 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
SRRM1-222ENST00000596378 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
SRRM1-222ENST00000596378 MT1FP04733 61 aa9.73□□□□□ -0.85
SRRM1-222ENST00000596378 MT2AP02795 61 aa9.72□□□□□ -0.85
SRRM1-222ENST00000596378 KRTAP10-10P60014 251 aa9.69□□□□□ -0.86
SRRM1-222ENST00000596378 KRTAP9-8Q9BYQ0 159 aa9.67□□□□□ -0.86
SRRM1-222ENST00000596378 PLAC4Q8WY50 150 aa9.65□□□□□ -0.87
SRRM1-222ENST00000596378 PP632Q6XCG6 107 aa9.64□□□□□ -0.87
SRRM1-222ENST00000596378 TNP1P09430 55 aa9.63□□□□□ -0.87
SRRM1-222ENST00000596378 H3BS24 57 aa9.6□□□□□ -0.87
SRRM1-222ENST00000596378 NDUFAF8A1L188 74 aa9.52□□□□□ -0.89
SRRM1-222ENST00000596378 KRTAP19-8Q3LI54 63 aa9.39□□□□□ -0.91
SRRM1-222ENST00000596378 KRTAP23-1A1A580 65 aa9.36□□□□□ -0.91
SRRM1-222ENST00000596378 MT1BP07438 61 aa9.34□□□□□ -0.91
SRRM1-222ENST00000596378 KRTAP9-3Q9BYQ3 159 aa9.27□□□□□ -0.93
SRRM1-222ENST00000596378 LCE3AQ5TA76 89 aa9.23□□□□□ -0.93
SRRM1-222ENST00000596378 KRTAP10-5P60370 271 aa9.22□□□□□ -0.93
SRRM1-222ENST00000596378 MT1XP80297 61 aa9.21□□□□□ -0.94
SRRM1-222ENST00000596378 LUZP6Q538Z0 58 aa9□□□□□ -0.97
SRRM1-222ENST00000596378 LCE2BO14633 110 aa8.97□□□□□ -0.97
SRRM1-222ENST00000596378 KRTAP10-7P60409 375 aaPredicted RBP8.97□□□□□ -0.97
SRRM1-222ENST00000596378 USH2AO75445 5202 aa8.96□□□□□ -0.97
SRRM1-222ENST00000596378 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
SRRM1-222ENST00000596378 SPRR5A0A1B0GTR4 108 aa8.93□□□□□ -0.98
SRRM1-222ENST00000596378 KRTAP10-12P60413 245 aa8.93□□□□□ -0.98
SRRM1-222ENST00000596378 KRTAP8-1Q8IUC2 63 aa8.93□□□□□ -0.98
SRRM1-222ENST00000596378 PRO2289Q9P1D8 64 aa8.83□□□□□ -1
SRRM1-222ENST00000596378 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
SRRM1-222ENST00000596378 KMT2DO14686 5537 aa8.69□□□□□ -1.02
SRRM1-222ENST00000596378 KRTAP19-5Q3LI72 72 aa8.53□□□□□ -1.04
SRRM1-222ENST00000596378 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
SRRM1-222ENST00000596378 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
SRRM1-222ENST00000596378 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
SRRM1-222ENST00000596378 A0A0A0MQY5 61 aa8.32□□□□□ -1.08
SRRM1-222ENST00000596378 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
SRRM1-222ENST00000596378 LCE3CQ5T5A8 94 aa8.24□□□□□ -1.09
SRRM1-222ENST00000596378 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.1
SRRM1-222ENST00000596378 KRTAP19-6Q3LI70 58 aa8.07□□□□□ -1.12
SRRM1-222ENST00000596378 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
SRRM1-222ENST00000596378 KRTAP9-6A8MVA2 160 aa7.98□□□□□ -1.13
SRRM1-222ENST00000596378 MT1EP04732 61 aa7.98□□□□□ -1.13
SRRM1-222ENST00000596378 MT1LQ93083 61 aa7.94□□□□□ -1.14
SRRM1-222ENST00000596378 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
SRRM1-222ENST00000596378 MUC12Q9UKN1 5478 aa7.73□□□□□ -1.17
SRRM1-222ENST00000596378 LCE2DQ5TA82 110 aaPredicted RBP7.71□□□□□ -1.18
SRRM1-222ENST00000596378 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms