RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
ZNF548-203ENST00000594668 MT1FP04733 61 aa4.39□□□□□ -1.71
ZNF548-203ENST00000594668 LCE2DQ5TA82 110 aaPredicted RBP4.39□□□□□ -1.71
ZNF548-203ENST00000594668 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
ZNF548-203ENST00000594668 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
ZNF548-203ENST00000594668 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
ZNF548-203ENST00000594668 NDUFC1O43677 76 aa4.35□□□□□ -1.71
ZNF548-203ENST00000594668 ACYP2P14621 99 aa4.35□□□□□ -1.71
ZNF548-203ENST00000594668 SPANXA2-OT1Q8N9U9 137 aa4.35□□□□□ -1.71
ZNF548-203ENST00000594668 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
ZNF548-203ENST00000594668 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
ZNF548-203ENST00000594668 H7BZZ5 65 aa4.33□□□□□ -1.72
ZNF548-203ENST00000594668 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
ZNF548-203ENST00000594668 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
ZNF548-203ENST00000594668 LCE2BO14633 110 aa4.25□□□□□ -1.73
ZNF548-203ENST00000594668 H0YAA0 97 aa4.24□□□□□ -1.73
ZNF548-203ENST00000594668 ADM2Q7Z4H4 148 aa4.24□□□□□ -1.73
ZNF548-203ENST00000594668 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
ZNF548-203ENST00000594668 COA5Q86WW8 74 aa4.23□□□□□ -1.73
ZNF548-203ENST00000594668 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
ZNF548-203ENST00000594668 USH2AO75445 5202 aa4.21□□□□□ -1.74
ZNF548-203ENST00000594668 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
ZNF548-203ENST00000594668 P0C880 135 aa4.18□□□□□ -1.74
ZNF548-203ENST00000594668 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
ZNF548-203ENST00000594668 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
ZNF548-203ENST00000594668 ATP5EP56381 51 aaPredicted RBP4.15□□□□□ -1.75
ZNF548-203ENST00000594668 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
ZNF548-203ENST00000594668 TMEM258P61165 79 aa4.14□□□□□ -1.75
ZNF548-203ENST00000594668 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
ZNF548-203ENST00000594668 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
ZNF548-203ENST00000594668 PCP4P48539 62 aa4.11□□□□□ -1.75
ZNF548-203ENST00000594668 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
ZNF548-203ENST00000594668 MT1BP07438 61 aa4.09□□□□□ -1.75
ZNF548-203ENST00000594668 R4GN34 69 aa4.08□□□□□ -1.76
ZNF548-203ENST00000594668 M0QZ58 72 aa4.07□□□□□ -1.76
ZNF548-203ENST00000594668 Q5VV11 94 aa4.07□□□□□ -1.76
ZNF548-203ENST00000594668 SEC61GP60059 68 aa4.04□□□□□ -1.76
ZNF548-203ENST00000594668 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
ZNF548-203ENST00000594668 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
ZNF548-203ENST00000594668 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
ZNF548-203ENST00000594668 A0A1B0GU69 56 aa4□□□□□ -1.77
ZNF548-203ENST00000594668 LINC01554Q52M75 96 aa4□□□□□ -1.77
ZNF548-203ENST00000594668 A0A1B0GU33 70 aa3.98□□□□□ -1.77
ZNF548-203ENST00000594668 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
ZNF548-203ENST00000594668 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
ZNF548-203ENST00000594668 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
ZNF548-203ENST00000594668 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
ZNF548-203ENST00000594668 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
ZNF548-203ENST00000594668 A6NN06 94 aa3.92□□□□□ -1.78
ZNF548-203ENST00000594668 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
ZNF548-203ENST00000594668 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
ZNF548-203ENST00000594668 A0A0D9SG42 100 aa3.89□□□□□ -1.79
ZNF548-203ENST00000594668 MT1XP80297 61 aa3.89□□□□□ -1.79
ZNF548-203ENST00000594668 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
ZNF548-203ENST00000594668 Q1T7F1 81 aa3.88□□□□□ -1.79
ZNF548-203ENST00000594668 A8MU10 97 aa3.86□□□□□ -1.79
ZNF548-203ENST00000594668 V9GYY9 64 aa3.86□□□□□ -1.79
ZNF548-203ENST00000594668 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
ZNF548-203ENST00000594668 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
ZNF548-203ENST00000594668 PSPHP1O15172 72 aa3.84□□□□□ -1.79
ZNF548-203ENST00000594668 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
ZNF548-203ENST00000594668 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
ZNF548-203ENST00000594668 H3BS24 57 aa3.82□□□□□ -1.8
ZNF548-203ENST00000594668 UQCR11O14957 56 aa3.82□□□□□ -1.8
ZNF548-203ENST00000594668 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
ZNF548-203ENST00000594668 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
ZNF548-203ENST00000594668 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
ZNF548-203ENST00000594668 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
ZNF548-203ENST00000594668 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
ZNF548-203ENST00000594668 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
ZNF548-203ENST00000594668 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
ZNF548-203ENST00000594668 KMT2DO14686 5537 aa3.72□□□□□ -1.81
ZNF548-203ENST00000594668 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
ZNF548-203ENST00000594668 A6NED7 52 aa3.7□□□□□ -1.82
ZNF548-203ENST00000594668 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
ZNF548-203ENST00000594668 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
ZNF548-203ENST00000594668 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
ZNF548-203ENST00000594668 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
ZNF548-203ENST00000594668 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
ZNF548-203ENST00000594668 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
ZNF548-203ENST00000594668 K7ERS5 55 aa3.6□□□□□ -1.83
ZNF548-203ENST00000594668 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
ZNF548-203ENST00000594668 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
ZNF548-203ENST00000594668 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
ZNF548-203ENST00000594668 TNP1P09430 55 aa3.56□□□□□ -1.84
ZNF548-203ENST00000594668 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
ZNF548-203ENST00000594668 NEBP20929 6669 aa3.5□□□□□ -1.85
ZNF548-203ENST00000594668 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
ZNF548-203ENST00000594668 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
ZNF548-203ENST00000594668 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
ZNF548-203ENST00000594668 SPRR2EP22531 72 aa3.45□□□□□ -1.86
ZNF548-203ENST00000594668 SPRR2BP35325 72 aa3.45□□□□□ -1.86
ZNF548-203ENST00000594668 SPRR2AP35326 72 aa3.45□□□□□ -1.86
ZNF548-203ENST00000594668 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
ZNF548-203ENST00000594668 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
ZNF548-203ENST00000594668 ROMO1P60602 79 aa3.44□□□□□ -1.86
ZNF548-203ENST00000594668 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
ZNF548-203ENST00000594668 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
ZNF548-203ENST00000594668 MT1EP04732 61 aa3.43□□□□□ -1.86
ZNF548-203ENST00000594668 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms