RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
ZNF548-203ENST00000594668 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
ZNF548-203ENST00000594668 ABCC9O60706 1549 aa18.94■□□□□ 0.62
ZNF548-203ENST00000594668 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
ZNF548-203ENST00000594668 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
ZNF548-203ENST00000594668 NACADO15069 1562 aa18.34■□□□□ 0.53
ZNF548-203ENST00000594668 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
ZNF548-203ENST00000594668 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
ZNF548-203ENST00000594668 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
ZNF548-203ENST00000594668 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
ZNF548-203ENST00000594668 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
ZNF548-203ENST00000594668 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
ZNF548-203ENST00000594668 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
ZNF548-203ENST00000594668 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
ZNF548-203ENST00000594668 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
ZNF548-203ENST00000594668 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
ZNF548-203ENST00000594668 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
ZNF548-203ENST00000594668 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
ZNF548-203ENST00000594668 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
ZNF548-203ENST00000594668 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
ZNF548-203ENST00000594668 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
ZNF548-203ENST00000594668 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
ZNF548-203ENST00000594668 WIZO95785 1651 aa16.97■□□□□ 0.31
ZNF548-203ENST00000594668 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
ZNF548-203ENST00000594668 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
ZNF548-203ENST00000594668 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
ZNF548-203ENST00000594668 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
ZNF548-203ENST00000594668 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
ZNF548-203ENST00000594668 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
ZNF548-203ENST00000594668 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
ZNF548-203ENST00000594668 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
ZNF548-203ENST00000594668 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
ZNF548-203ENST00000594668 NESP48681 1621 aa16.48■□□□□ 0.23
ZNF548-203ENST00000594668 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
ZNF548-203ENST00000594668 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
ZNF548-203ENST00000594668 CFTRP13569 1480 aa16.39■□□□□ 0.21
ZNF548-203ENST00000594668 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
ZNF548-203ENST00000594668 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
ZNF548-203ENST00000594668 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
ZNF548-203ENST00000594668 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
ZNF548-203ENST00000594668 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
ZNF548-203ENST00000594668 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
ZNF548-203ENST00000594668 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
ZNF548-203ENST00000594668 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
ZNF548-203ENST00000594668 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
ZNF548-203ENST00000594668 WDR62O43379 1518 aa16.08■□□□□ 0.16
ZNF548-203ENST00000594668 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
ZNF548-203ENST00000594668 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
ZNF548-203ENST00000594668 DNMBPQ6XZF7 1577 aa16.03■□□□□ 0.16
ZNF548-203ENST00000594668 CUX1P39880 1505 aa16.03■□□□□ 0.16
ZNF548-203ENST00000594668 CUX2O14529 1486 aa15.99■□□□□ 0.15
ZNF548-203ENST00000594668 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
ZNF548-203ENST00000594668 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
ZNF548-203ENST00000594668 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
ZNF548-203ENST00000594668 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
ZNF548-203ENST00000594668 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
ZNF548-203ENST00000594668 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
ZNF548-203ENST00000594668 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
ZNF548-203ENST00000594668 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
ZNF548-203ENST00000594668 SOGA1O94964 1423 aa15.85■□□□□ 0.13
ZNF548-203ENST00000594668 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
ZNF548-203ENST00000594668 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
ZNF548-203ENST00000594668 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
ZNF548-203ENST00000594668 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
ZNF548-203ENST00000594668 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
ZNF548-203ENST00000594668 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
ZNF548-203ENST00000594668 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
ZNF548-203ENST00000594668 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■■□□ 17
ZNF548-203ENST00000594668 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
ZNF548-203ENST00000594668 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
ZNF548-203ENST00000594668 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
ZNF548-203ENST00000594668 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
ZNF548-203ENST00000594668 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
ZNF548-203ENST00000594668 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
ZNF548-203ENST00000594668 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
ZNF548-203ENST00000594668 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.08
ZNF548-203ENST00000594668 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
ZNF548-203ENST00000594668 IGF1RP08069 1367 aa15.56■□□□□ 0.08
ZNF548-203ENST00000594668 CHD1O14646 1710 aa15.55■□□□□ 0.08
ZNF548-203ENST00000594668 MAGI1Q96QZ7 1491 aaPredicted RBP15.54■□□□□ 0.08
ZNF548-203ENST00000594668 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
ZNF548-203ENST00000594668 CUL7Q14999 1698 aa15.49■□□□□ 0.07
ZNF548-203ENST00000594668 FBLN2P98095 1184 aa15.49■□□□□ 0.07
ZNF548-203ENST00000594668 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
ZNF548-203ENST00000594668 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
ZNF548-203ENST00000594668 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
ZNF548-203ENST00000594668 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
ZNF548-203ENST00000594668 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
ZNF548-203ENST00000594668 EEA1Q15075 1411 aa15.45■□□□□ 0.06
ZNF548-203ENST00000594668 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
ZNF548-203ENST00000594668 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
ZNF548-203ENST00000594668 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
ZNF548-203ENST00000594668 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
ZNF548-203ENST00000594668 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
ZNF548-203ENST00000594668 CEP170Q5SW79 1584 aa15.37■□□□□ 0.05
ZNF548-203ENST00000594668 NUP160Q12769 1436 aa15.34■□□□□ 0.05
ZNF548-203ENST00000594668 KIF21BO75037 1637 aa15.33■□□□□ 0.04
ZNF548-203ENST00000594668 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
ZNF548-203ENST00000594668 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
ZNF548-203ENST00000594668 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms