RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
COLGALT1-202ENST00000593832 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
COLGALT1-202ENST00000593832 LUZP6Q538Z0 58 aa7.59□□□□□ -1.19
COLGALT1-202ENST00000593832 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
COLGALT1-202ENST00000593832 A0A0D9SG42 100 aa7.56□□□□□ -1.2
COLGALT1-202ENST00000593832 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
COLGALT1-202ENST00000593832 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
COLGALT1-202ENST00000593832 RYR3Q15413 4870 aa7.54□□□□□ -1.2
COLGALT1-202ENST00000593832 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
COLGALT1-202ENST00000593832 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
COLGALT1-202ENST00000593832 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
COLGALT1-202ENST00000593832 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
COLGALT1-202ENST00000593832 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
COLGALT1-202ENST00000593832 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
COLGALT1-202ENST00000593832 HSPG2P98160 4391 aa7.33□□□□□ -1.24
COLGALT1-202ENST00000593832 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
COLGALT1-202ENST00000593832 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
COLGALT1-202ENST00000593832 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
COLGALT1-202ENST00000593832 Q5VSD8 79 aa7.3□□□□□ -1.24
COLGALT1-202ENST00000593832 EPPK1P58107 5090 aaKnown RBP7.3□□□□□ -1.24
COLGALT1-202ENST00000593832 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
COLGALT1-202ENST00000593832 RYR1P21817 5038 aa7.26□□□□□ -1.25
COLGALT1-202ENST00000593832 KRTAP17-1Q9BYP8 105 aa7.24□□□□□ -1.25
COLGALT1-202ENST00000593832 FAT3Q8TDW7 4589 aa7.21□□□□□ -1.25
COLGALT1-202ENST00000593832 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
COLGALT1-202ENST00000593832 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
COLGALT1-202ENST00000593832 S4R3F8 94 aa7.14□□□□□ -1.27
COLGALT1-202ENST00000593832 TNXBP22105 4242 aa7.13□□□□□ -1.27
COLGALT1-202ENST00000593832 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
COLGALT1-202ENST00000593832 XP32Q5T750 250 aa7.04□□□□□ -1.28
COLGALT1-202ENST00000593832 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
COLGALT1-202ENST00000593832 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
COLGALT1-202ENST00000593832 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
COLGALT1-202ENST00000593832 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
COLGALT1-202ENST00000593832 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
COLGALT1-202ENST00000593832 LPAP08519 4548 aa6.92□□□□□ -1.3
COLGALT1-202ENST00000593832 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
COLGALT1-202ENST00000593832 M0QZ58 72 aa6.88□□□□□ -1.31
COLGALT1-202ENST00000593832 HERC2O95714 4834 aa6.83□□□□□ -1.32
COLGALT1-202ENST00000593832 LRP2P98164 4655 aa6.81□□□□□ -1.32
COLGALT1-202ENST00000593832 J3QL48 77 aa6.79□□□□□ -1.32
COLGALT1-202ENST00000593832 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
COLGALT1-202ENST00000593832 R4GN34 69 aa6.65□□□□□ -1.35
COLGALT1-202ENST00000593832 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
COLGALT1-202ENST00000593832 HERC1Q15751 4861 aa6.59□□□□□ -1.36
COLGALT1-202ENST00000593832 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
COLGALT1-202ENST00000593832 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
COLGALT1-202ENST00000593832 MUC2Q02817 5179 aa6.48□□□□□ -1.37
COLGALT1-202ENST00000593832 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
COLGALT1-202ENST00000593832 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
COLGALT1-202ENST00000593832 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
COLGALT1-202ENST00000593832 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
COLGALT1-202ENST00000593832 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
COLGALT1-202ENST00000593832 KRTAP19-2Q3LHN2 52 aa6.32□□□□□ -1.4
COLGALT1-202ENST00000593832 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
COLGALT1-202ENST00000593832 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
COLGALT1-202ENST00000593832 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
COLGALT1-202ENST00000593832 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
COLGALT1-202ENST00000593832 TNP1P09430 55 aa6.14□□□□□ -1.43
COLGALT1-202ENST00000593832 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
COLGALT1-202ENST00000593832 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
COLGALT1-202ENST00000593832 M0R2T5 61 aa5.98□□□□□ -1.45
COLGALT1-202ENST00000593832 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
COLGALT1-202ENST00000593832 INE1O15225 51 aa5.98□□□□□ -1.45
COLGALT1-202ENST00000593832 MT1HP80294 61 aa5.88□□□□□ -1.47
COLGALT1-202ENST00000593832 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
COLGALT1-202ENST00000593832 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
COLGALT1-202ENST00000593832 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
COLGALT1-202ENST00000593832 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
COLGALT1-202ENST00000593832 MT1FP04733 61 aa5.7□□□□□ -1.5
COLGALT1-202ENST00000593832 MT2AP02795 61 aa5.7□□□□□ -1.5
COLGALT1-202ENST00000593832 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
COLGALT1-202ENST00000593832 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
COLGALT1-202ENST00000593832 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
COLGALT1-202ENST00000593832 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
COLGALT1-202ENST00000593832 MT1XP80297 61 aa5.52□□□□□ -1.53
COLGALT1-202ENST00000593832 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
COLGALT1-202ENST00000593832 MT1BP07438 61 aa5.49□□□□□ -1.53
COLGALT1-202ENST00000593832 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
COLGALT1-202ENST00000593832 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
COLGALT1-202ENST00000593832 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
COLGALT1-202ENST00000593832 USH2AO75445 5202 aa5.42□□□□□ -1.54
COLGALT1-202ENST00000593832 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
COLGALT1-202ENST00000593832 LCE2BO14633 110 aa5.32□□□□□ -1.56
COLGALT1-202ENST00000593832 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
COLGALT1-202ENST00000593832 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
COLGALT1-202ENST00000593832 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
COLGALT1-202ENST00000593832 KMT2DO14686 5537 aa5.12□□□□□ -1.59
COLGALT1-202ENST00000593832 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
COLGALT1-202ENST00000593832 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
COLGALT1-202ENST00000593832 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
COLGALT1-202ENST00000593832 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
COLGALT1-202ENST00000593832 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
COLGALT1-202ENST00000593832 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
COLGALT1-202ENST00000593832 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
COLGALT1-202ENST00000593832 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
COLGALT1-202ENST00000593832 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
COLGALT1-202ENST00000593832 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
COLGALT1-202ENST00000593832 MT1LQ93083 61 aa4.79□□□□□ -1.64
COLGALT1-202ENST00000593832 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms