RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
SYMPK-202ENST00000593504 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
SYMPK-202ENST00000593504 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
SYMPK-202ENST00000593504 ANK2Q01484 3957 aa7.26□□□□□ -1.25
SYMPK-202ENST00000593504 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
SYMPK-202ENST00000593504 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
SYMPK-202ENST00000593504 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
SYMPK-202ENST00000593504 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
SYMPK-202ENST00000593504 PRO2289Q9P1D8 64 aa7.14□□□□□ -1.27
SYMPK-202ENST00000593504 CMYA5Q8N3K9 4069 aa7.14□□□□□ -1.27
SYMPK-202ENST00000593504 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
SYMPK-202ENST00000593504 DNAH2Q9P225 4427 aa7.11□□□□□ -1.27
SYMPK-202ENST00000593504 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
SYMPK-202ENST00000593504 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
SYMPK-202ENST00000593504 KMT2AQ03164 3969 aa7.03□□□□□ -1.28
SYMPK-202ENST00000593504 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
SYMPK-202ENST00000593504 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
SYMPK-202ENST00000593504 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
SYMPK-202ENST00000593504 FAT1Q14517 4588 aa6.98□□□□□ -1.29
SYMPK-202ENST00000593504 FAT2Q9NYQ8 4349 aa6.92□□□□□ -1.3
SYMPK-202ENST00000593504 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
SYMPK-202ENST00000593504 LYSTQ99698 3801 aa6.85□□□□□ -1.31
SYMPK-202ENST00000593504 INE1O15225 51 aa6.82□□□□□ -1.32
SYMPK-202ENST00000593504 DNAH6Q9C0G6 4158 aa6.82□□□□□ -1.32
SYMPK-202ENST00000593504 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
SYMPK-202ENST00000593504 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
SYMPK-202ENST00000593504 HECTD4Q9Y4D8 3996 aa6.78□□□□□ -1.32
SYMPK-202ENST00000593504 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
SYMPK-202ENST00000593504 RYR1P21817 5038 aa6.75□□□□□ -1.33
SYMPK-202ENST00000593504 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
SYMPK-202ENST00000593504 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.33
SYMPK-202ENST00000593504 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.35
SYMPK-202ENST00000593504 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
SYMPK-202ENST00000593504 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
SYMPK-202ENST00000593504 HYDINQ4G0P3 5121 aa6.61□□□□□ -1.35
SYMPK-202ENST00000593504 RYR2Q92736 4967 aa6.58□□□□□ -1.36
SYMPK-202ENST00000593504 RYR3Q15413 4870 aa6.58□□□□□ -1.36
SYMPK-202ENST00000593504 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
SYMPK-202ENST00000593504 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
SYMPK-202ENST00000593504 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
SYMPK-202ENST00000593504 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
SYMPK-202ENST00000593504 MT1HP80294 61 aa6.43□□□□□ -1.38
SYMPK-202ENST00000593504 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
SYMPK-202ENST00000593504 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
SYMPK-202ENST00000593504 PKD1P98161 4303 aa6.4□□□□□ -1.39
SYMPK-202ENST00000593504 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
SYMPK-202ENST00000593504 HSPG2P98160 4391 aa6.35□□□□□ -1.39
SYMPK-202ENST00000593504 MT2AP02795 61 aa6.32□□□□□ -1.4
SYMPK-202ENST00000593504 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
SYMPK-202ENST00000593504 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
SYMPK-202ENST00000593504 MT1FP04733 61 aa6.23□□□□□ -1.41
SYMPK-202ENST00000593504 HERC2O95714 4834 aa6.21□□□□□ -1.42
SYMPK-202ENST00000593504 KMT2CQ8NEZ4 4911 aaKnown RBP6.19□□□□□ -1.42
SYMPK-202ENST00000593504 LRP2P98164 4655 aa6.13□□□□□ -1.43
SYMPK-202ENST00000593504 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
SYMPK-202ENST00000593504 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SYMPK-202ENST00000593504 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
SYMPK-202ENST00000593504 TNXBP22105 4242 aa6.07□□□□□ -1.44
SYMPK-202ENST00000593504 LPAP08519 4548 aa6.02□□□□□ -1.45
SYMPK-202ENST00000593504 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
SYMPK-202ENST00000593504 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
SYMPK-202ENST00000593504 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
SYMPK-202ENST00000593504 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
SYMPK-202ENST00000593504 HERC1Q15751 4861 aa5.92□□□□□ -1.46
SYMPK-202ENST00000593504 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
SYMPK-202ENST00000593504 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
SYMPK-202ENST00000593504 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
SYMPK-202ENST00000593504 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
SYMPK-202ENST00000593504 PCLOQ9Y6V0 5065 aa5.81□□□□□ -1.48
SYMPK-202ENST00000593504 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
SYMPK-202ENST00000593504 MT1BP07438 61 aa5.78□□□□□ -1.48
SYMPK-202ENST00000593504 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
SYMPK-202ENST00000593504 MT1XP80297 61 aa5.76□□□□□ -1.49
SYMPK-202ENST00000593504 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
SYMPK-202ENST00000593504 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
SYMPK-202ENST00000593504 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
SYMPK-202ENST00000593504 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
SYMPK-202ENST00000593504 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.5
SYMPK-202ENST00000593504 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.51
SYMPK-202ENST00000593504 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
SYMPK-202ENST00000593504 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
SYMPK-202ENST00000593504 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
SYMPK-202ENST00000593504 LCE2BO14633 110 aa5.47□□□□□ -1.53
SYMPK-202ENST00000593504 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
SYMPK-202ENST00000593504 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
SYMPK-202ENST00000593504 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.54
SYMPK-202ENST00000593504 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
SYMPK-202ENST00000593504 MUC2Q02817 5179 aa5.24□□□□□ -1.57
SYMPK-202ENST00000593504 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
SYMPK-202ENST00000593504 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
SYMPK-202ENST00000593504 MT1GP13640 62 aa5.2□□□□□ -1.58
SYMPK-202ENST00000593504 SPRR2EP22531 72 aa5.2□□□□□ -1.58
SYMPK-202ENST00000593504 SPRR2BP35325 72 aa5.2□□□□□ -1.58
SYMPK-202ENST00000593504 SPRR2AP35326 72 aa5.2□□□□□ -1.58
SYMPK-202ENST00000593504 MT1LQ93083 61 aa5.13□□□□□ -1.59
SYMPK-202ENST00000593504 MT1EP04732 61 aa5.13□□□□□ -1.59
SYMPK-202ENST00000593504 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
SYMPK-202ENST00000593504 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
SYMPK-202ENST00000593504 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
SYMPK-202ENST00000593504 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms